Gene Information

Name : DelCs14_3085 (DelCs14_3085)
Accession : YP_004488444.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 3492769 - 3492960 bp
Length : 192 bp
Strand : -
Note : KEGG: pop:POPTR_946046 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3

DNA sequence :
ATGAAAAACACCATCCGTGAACTGCGCGCCGAGCGCGGCTGGAGCCAGGCTGCGCTGGCGGACCTGCTGGGCGTGTCGCG
CCAGACCGTCAATGCCATAGAGACGGGCCGCTACGACCCCAGCCTGCCGCTGGCATTCGCCATTGCCCGGGTGTTCGAGA
CCCGGATCGAGGCGATCTTCCAGGAGGGTTGA

Protein sequence :
MKNTIRELRAERGWSQAALADLLGVSRQTVNAIETGRYDPSLPLAFAIARVFETRIEAIFQEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-11 54
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-07 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 7e-08 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_3085 YP_004488444.1 XRE family transcriptional regulator VFG2175 Protein 3e-08 50
DelCs14_3085 YP_004488444.1 XRE family transcriptional regulator VFG2168 Protein 3e-08 50