Gene Information

Name : DelCs14_2973 (DelCs14_2973)
Accession : YP_004488335.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : type VI secretion lipoprotein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 3351403 - 3351945 bp
Length : 543 bp
Strand : -
Note : KEGG: dac:Daci_3850 type VI secretion protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301

DNA sequence :

ATGTCGCTCACCAAAACCGGCAAGAGTGGTCAGAAATTCATCGCGCGCAACCGTGCGCCGCGCGTGCAGATCGAGTACGA
CGTCGAGATCTACGGTTCGGAAAAGAAGGTGCAGATCCCCTTCGTGATGGGCGTGCTGGCCGATCTGTCGGGCAAGCCCG
TCGATCCGCTGCCCGAAATCGCCGACCGCAAGTTCCTGGAAATCGACATCGACAACTTCGATGCGCGCATGAAGTCCATC
AAGCCCCGCGTCGCCTTCCAGGTGGACAACACGCTGACGGGCGAGGGCAAGCTCAACATCGACCTGAGCTTCGAGAGCAT
GGAGGACTTCTCCCCCGCCGCCATCGCGCGGCGCGTGGGCGCGCTCAACTCGCTGCTGGAGGCCCGCACCCAGCTGCACA
ACCTGCTTTCCTACATGGACGGCAAGCAGGGCGCCGAGGAGCTGATCGGCAAGGTGCTCAAGGACCCTGCGCTGCTCAAG
TCGCTGGCCGCCGCGCCCAACATCACTGCCCCGCAGGCCTTGGGCCCTGCATCCGAGGCTTGA

Protein sequence :

MSLTKTGKSGQKFIARNRAPRVQIEYDVEIYGSEKKVQIPFVMGVLADLSGKPVDPLPEIADRKFLEIDIDNFDARMKSI
KPRVAFQVDNTLTGEGKLNIDLSFESMEDFSPAAIARRVGALNSLLEARTQLHNLLSYMDGKQGAEELIGKVLKDPALLK
SLAAAPNITAPQALGPASEA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	3e-58	71

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
DelCs14_2973	YP_004488335.1	type VI secretion lipoprotein	VFG2069	Protein	2e-59	73