Gene Information

Name : DelCs14_2605 (DelCs14_2605)
Accession : YP_004487972.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : molybdopterin dinucleotide-binding region
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0243
EC number : -
Position : 2973981 - 2977181 bp
Length : 3201 bp
Strand : -
Note : PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase Fe4S4 region; KEGG: dac:Daci_4246 molybdopterin dinucleotide-binding region

DNA sequence :
ATGACCGACAAGAAGAAACTCCCCCAAGCTCCCGAAGATTCCCTGGATGCCGAGGCCGCCCGCCGCCGCCTGCTGCTGCG
CGGCGGACTCACCGCCGGTGGGCTGGCCGCCTTTGCGGCCGGCTACGGTGAAACACTGGCGCGCGGTGCCAAGGGCCTGG
TCGCAGGCACCTCGGGCACGCCCACGGCCAGCGCCACGCGCGGCAATTCGCTGACGCCGGAGTTCCGCATCGACCCGGCC
ACGGGCGCGCTCGCCACCCAGCCCGGCCAGGTGGTCAGCCCCTCCAGCTGCCTGGGCTGCTGGACGCAGTGCGGCGTGCG
CGTGCGTGTCGATACCGCCAGCAACCGCATCCTGCGCGTGGCAGGCAACCCCTACCACCCGCTGGCCACCACGCGCCCGG
CCGCCATGGAAGAACCCGTGCGCGAGGTCTACGCCAAACTGGGCAAGGAGCTGGGCCTGGAGGGCCGGGCCACGGCCTGC
GCGCGCGGCTCGTCCATGCTGGAGCACCAGAACGCACCGCACCGCGTGCTCACCCCGCTCAAGCGCGTGGGCCCGCGCGG
CAGCGGCCGCTGGCAGAGCATTTCCTTCGAGCAGCTGGTGCAGGAAGTCTGCGAGGGCGGCGATCTGTTCGGCGAAGGCC
AGGTCGATGGCCTGCGCGCCATCTGGGACACCAAGACGCCGCTGGACGCCGACAACCCCGAGTTCGGCCCGCGCTCCAAC
CAGTTGCTGGTGACCGACGCCTCCAACGAAGGCCGCGCCCAGCTGCTGCGCCGCTTTGCAGGGCCGTCCTTCGGCACCGT
GAACGTCAGCAACCACGGCGCCTACTGCGGCCAGAGCTTTCGCGTGGGTGCGGCAGCGGCCCTGGGCGACCTGCCCGGCA
TGCCGCACGGCAAGCCCGACTGGAGCCATGCCAGCTTCGGCCTGTTCATCGGCGCGGCGCCCGCGCAGTCCGGCAACCCC
TTCCAGCGCCAGGGCCGCGAACTGGCCGAGGCCCGCTCGCGCGACGACAACCGTTTCCGCTACGTGGTGGTCTCGCCCGT
GCTGCCCACCTCGTCCAGCCTGGCTGCGGGCAGCGGCAACCGCTGGCTGGCCGTCAAGCCGGCCAGCGACCTGGCCCTGG
CCATGGCGCTGATCCGCGTCATCCTGGACGAGGCGCGCCATGACACGGGCTTTCTCGCCCAGCCCGGCCCGGCCGCCATG
CAGGCCGCGGGCGAGGCGTCCTGGAGCAATGCCACGCACCTGCTGGTCAACGAGCCCGGCCACCCGCGCCATGGCAGCTT
TCTGCGCGGCGCCGACCTGGGCTGGGCCCTGCCCGCGCCAGCCGAAGACGGCAAGCCGGCCCAGGATGTGTTCGTGGTGC
AGCGTGCCGATGGCAGCCTGGCGCCGCACACCCAGGCCGAGCCTGCACAGCTGATGGTGCGCACCCGCGTGGCCGTGCCC
GGCCTGAAGGCCGAAGGCGCAGACCAGGCCCCCGAGCTGTCGGTCTGCTCCTCGCTGGCCAAGCTGCATGAGCAGGCCAG
CCTCAAGACACTGGACGAGTACGCGGCGCTGTGCGGCGTGGCACGCGGCGAGATCGAGGCGCTGGCGCGCGAGTTCACCA
GCCATGGCAAGCGCGCCGTAGCCGATGCGCATGGCGGCACCATGAGCGGCGCGGGTTTCTACACCGCCTACGCCATCAGC
ATGCTCAACACCCTGGTGGGCAACCTCAACGTGCAGGGCGGCCTGGTGCTGGATGCCGGCCCGTTCGGCCCCTTCGGCCC
GGGCCCGCGCTACGACTTCGCCAACTTCGACGGCAAGGTCAAGCCGCGCGGCCTGGCGCTGTCACGCCACCGCCAGCCCT
ACGAGAAAAGCACGGAATTCCAGCGCAAGCGCGAGGGCCAGCCCGAGGGCGCGAAGGACTACCCCGCCGCCCAGGCCCCG
TGGTACCCGGCCGTGGGCGGCCTGTCCAGCGAGATGCTGGCCAGCGCGCTGGCCGGCTACCCCTACCGCGCCAAGGCCTG
GATCAACCACATGAGCAACCCCGTCTACGGCATTGCGGGCTTTCGCAACGCGCTGGTGGACGATCTCAAGGACCCGAAGA
AGCTGCCGCTGATCGTCTCCATCGATCCCTTCATCAACGAGACCAGCGCGCTGGCCGATTTCATCGTGCCCGATACCGTG
ACCTACGAGAGCTGGGGCATCTCGGCGCCCTGGGCCGACGTGGTGGCCAAAAGCTCCACCGTGCGCTGGCCCGTGGTGCA
GCCCGCCGTGGCGCGCACGGCCGGCGGCCAGCCCGTGAACGTGGAGAGCTTTCTCTTTGCCGTGGCAGAACGGCTGGGCC
TGCCGGGCTTTGGCGAGGCCGCCATCAAGGACGCCCAGGGCCAGCCCCATGCGCTGCGCTCGGCCGAGGACTTCTTCATC
CACGCCCTGGCCAACGTGGCCTGGGCAGGTGGCAAGCCCGTGCCGGCGGCCAGCGATGACGACATCGCCATCACCGGCGT
GGACAGGCTGGTGCCCGCACTGCGCCAGCGCCTGAAGGACGATGAATGGCGCCAGGTGGCCATGCTGCTGACGCGCGGCG
GGCGCTTCGACCGCATCGAGGACGCCTGGAAGGACGGCCACACCCGCAAGGCCCACGCGCCTGCCCTGCAGGTGTGGAGC
GAGGAGCTGGCCCGCATGCGCCACGCCATGACGGGCGAGCGCTACAGCGGCTGCCCCACCTGGTATCCGGCGCGGCTGGC
CGACGGCAGCGCCATGCGCACGCATTTCGGCGAGCAGCAATGGCCGCTGCTGCTGACCTCGTACAAGTCCAACCTGATGA
GTTCCATGTCGATTGCCGTCTCGCGGCTGCGCCAGGTGCATCCGCACAACCCGGTGTCCCTGCACCGCGATGACGCCGAG
CGGCTGGGCATCGCCAACGGCGACACGGTGCGCATCCGCACGCCGGGCGGCGCGGTGACGGCCGTGGCCATGGTGCGCGA
CGGCGTGATGCCGGGCACCGTGGCCATCGAGCACGGCTACGGCCACCGCGAACTGGGCGCAGGCCGCCACAGCATCGACG
GCAAGCCCATGCCGGTGAACGCCGAGCATGCCAATGGCGTGAACCTCAATGACCTGGGCTTTGCCGATCCCACGCGGCCC
GGCTGCAAAAACGTGTGGGTGGACTGGGTGTCGGGCGCCGCGGTGCGCCAGGGCCTGCCTGCGCGCATCGAGAAGGTCTG
A

Protein sequence :
MTDKKKLPQAPEDSLDAEAARRRLLLRGGLTAGGLAAFAAGYGETLARGAKGLVAGTSGTPTASATRGNSLTPEFRIDPA
TGALATQPGQVVSPSSCLGCWTQCGVRVRVDTASNRILRVAGNPYHPLATTRPAAMEEPVREVYAKLGKELGLEGRATAC
ARGSSMLEHQNAPHRVLTPLKRVGPRGSGRWQSISFEQLVQEVCEGGDLFGEGQVDGLRAIWDTKTPLDADNPEFGPRSN
QLLVTDASNEGRAQLLRRFAGPSFGTVNVSNHGAYCGQSFRVGAAAALGDLPGMPHGKPDWSHASFGLFIGAAPAQSGNP
FQRQGRELAEARSRDDNRFRYVVVSPVLPTSSSLAAGSGNRWLAVKPASDLALAMALIRVILDEARHDTGFLAQPGPAAM
QAAGEASWSNATHLLVNEPGHPRHGSFLRGADLGWALPAPAEDGKPAQDVFVVQRADGSLAPHTQAEPAQLMVRTRVAVP
GLKAEGADQAPELSVCSSLAKLHEQASLKTLDEYAALCGVARGEIEALAREFTSHGKRAVADAHGGTMSGAGFYTAYAIS
MLNTLVGNLNVQGGLVLDAGPFGPFGPGPRYDFANFDGKVKPRGLALSRHRQPYEKSTEFQRKREGQPEGAKDYPAAQAP
WYPAVGGLSSEMLASALAGYPYRAKAWINHMSNPVYGIAGFRNALVDDLKDPKKLPLIVSIDPFINETSALADFIVPDTV
TYESWGISAPWADVVAKSSTVRWPVVQPAVARTAGGQPVNVESFLFAVAERLGLPGFGEAAIKDAQGQPHALRSAEDFFI
HALANVAWAGGKPVPAASDDDIAITGVDRLVPALRQRLKDDEWRQVAMLLTRGGRFDRIEDAWKDGHTRKAHAPALQVWS
EELARMRHAMTGERYSGCPTWYPARLADGSAMRTHFGEQQWPLLLTSYKSNLMSSMSIAVSRLRQVHPHNPVSLHRDDAE
RLGIANGDTVRIRTPGGAVTAVAMVRDGVMPGTVAIEHGYGHRELGAGRHSIDGKPMPVNAEHANGVNLNDLGFADPTRP
GCKNVWVDWVSGAAVRQGLPARIEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrA YP_216391.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 51
ttrA NP_456144.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 51
ttrA NP_805054.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 51
ttrA NP_460348.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 51
ttrA CAB37416.1 tetrathionate reductase subunit A (TtrA) Virulence SPI-2 Protein 0.0 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_2605 YP_004487972.1 molybdopterin dinucleotide-binding region VFG0484 Protein 0.0 51