Gene Information

Name : DelCs14_1832 (DelCs14_1832)
Accession : YP_004487208.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2052897 - 2053223 bp
Length : 327 bp
Strand : +
Note : PFAM: Transposase IS3/IS911; KEGG: transposase IS3/is911 family protein

DNA sequence :
ATGAGCAAGAAGTCGAACCAGTTTTCACCCGAAGTCCGCGAACGCGCTGTTCGCATGGTGCGCGAGCACCGCAGCGAGTA
CCCCTCGCTGTGGGCCGCCATCGAATCCATCGCTCCCAAGATCGGCTGCGTGCCCCAGACCCTCAACGAATGGGTCAAGC
GCGATGAGATCGACACCGGTACCCGGGCCGGCGTCACGACGACCGATCTGCAGCGCCTGAAAGAACTCGAACGCGAGAAC
AAGGAGCTGCGCAAGGCCAACGAGATCCTGAAACTGGCCAGCGCGTTTTTCGCCCAGGCGGAGCTCGACCGCCGTCTGAA
GTCCTGA

Protein sequence :
MSKKSNQFSPEVRERAVRMVREHRSEYPSLWAAIESIAPKIGCVPQTLNEWVKRDEIDTGTRAGVTTTDLQRLKELEREN
KELRKANEILKLASAFFAQAELDRRLKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 4e-12 65
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 4e-12 65
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 4e-12 65
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 4e-12 65
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 3e-12 64
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 3e-12 64
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 3e-12 64
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 3e-12 64
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 5e-12 64
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 3e-10 63
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 3e-10 63
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 3e-10 63
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-09 63
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-09 63
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 9e-09 63
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 6e-09 63
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 9e-09 63
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 6e-09 63
unnamed AAF09023.1 unknown Not tested SHI-O Protein 7e-09 62
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 7e-09 62
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 5e-08 61
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 1e-07 61
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 7e-09 61
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 2e-07 60
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-07 60
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 3e-07 60
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 5e-07 60
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 3e-07 60
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-07 60
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-07 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_1832 YP_004487208.1 transposase IS3/IS911 family protein VFG0643 Protein 2e-09 63
DelCs14_1832 YP_004487208.1 transposase IS3/IS911 family protein VFG1603 Protein 2e-08 61
DelCs14_1832 YP_004487208.1 transposase IS3/IS911 family protein VFG0606 Protein 2e-09 61
DelCs14_1832 YP_004487208.1 transposase IS3/IS911 family protein VFG1717 Protein 1e-07 60