Gene Information

Name : DelCs14_1761 (DelCs14_1761)
Accession : YP_004487144.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Unknown
Product : transposase IS4 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 1982351 - 1983334 bp
Length : 984 bp
Strand : +
Note : PFAM: Transposase, IS4-like; KEGG: ajs:Ajs_2718 transposase, IS4 family protein

DNA sequence :
ATGAAACAGATGAGCCTGGGCGAGAGCGGATTCGAGCGCAAGACCAAGAGGACTCGCAAGCGCGAGTTCCTCGATGAGAT
GAACCTCGTGGTGCCCTGGGCCGAGCTGGTATCGCTGATCGCGCTGCATGCGCCCGCACCAGGTGCCAAGGGCGGACGCC
CACCGTTCGCCGTCGAGACCATGCTGCGCATCCACTTCATTCAACAATGGTTCAACCTCTCGGACCCGGCGATGGAGGAG
GCGCTGTACGACATGGCACTGTTCCGTGAGTTTGTGGGTCTGGATGCCGGCGAGGACAACCTGCCCGACGAGAGCACCAT
CCTGCGCTTTCGCCACCTGCTCGAAACCCACAACCTGAGCTTGCAGATCCTGGCCACCGTCAACGCCACGCTGGCGGCCA
AGGGTCTGCTCCTCAAGAGCGGGACAGTGGTCGATGCCACGCTGATCGCTGCCCCGAGTTCGACCAAGAACAGCAGCGGC
GAACGTGACCCCGAGATGCACCAGACCAAGAAGGGCAATCAATGGCACTTCGGGATGAAGGCCCACATCGGGGTCGATGC
GGACTCGGGCCTGGTACACACGGTGGTGGGCACAGCGGCCAATGTCAACGACGTGACGCAGGCGCACGCGCTGGTGCATG
GAGAAGAAACAGACGTCTTTGCCGACGCGGGCTACCAGGGTGTGGGCAAGCGCGATGAAACGCAGGACATCGAAGTCAAC
TGGCATGTGGCCATGCGGCCGGGCAAGCGCAAGGTGCTGGACCAGAGCACTCCGATAGGCGCGATCCTGGACAAACTGGA
GCAGACCAAAGCGCGTATCCGGGCCAAGGTCGAACACCCGTTCAGGGTGATCAAGCGCCAGTTCGGGCATGTGAAGGTGC
GCTACCGGGGCTTGACCAAGAACACGGCGCAACTGCACACCTTGTTCGCACTGTCCAACCTGTGGATGGTGCGGCGCACG
TTGCTGCAGGAGATGCGGGGATGA

Protein sequence :
MKQMSLGESGFERKTKRTRKREFLDEMNLVVPWAELVSLIALHAPAPGAKGGRPPFAVETMLRIHFIQQWFNLSDPAMEE
ALYDMALFREFVGLDAGEDNLPDESTILRFRHLLETHNLSLQILATVNATLAAKGLLLKSGTVVDATLIAAPSSTKNSSG
ERDPEMHQTKKGNQWHFGMKAHIGVDADSGLVHTVVGTAANVNDVTQAHALVHGEETDVFADAGYQGVGKRDETQDIEVN
WHVAMRPGKRKVLDQSTPIGAILDKLEQTKARIRAKVEHPFRVIKRQFGHVKVRYRGLTKNTAQLHTLFALSNLWMVRRT
LLQEMRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 2e-76 63
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 3e-76 63
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 8e-85 59
unnamed AAO33449.1 putative transposase Not tested Not named Protein 2e-70 58
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 1e-59 50
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 1e-59 50