Gene Information

Name : DelCs14_1738 (DelCs14_1738)
Accession : YP_004487122.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1955145 - 1956755 bp
Length : 1611 bp
Strand : -
Note : PFAM: Transposase, IS66; KEGG: pol:Bpro_5535 transposase IS66

DNA sequence :
ATGACCTCGCAGGAACTGCTTGCCCTGAACGCCGTGCTCAGTGGCGAAGTGCAGCGCTCGCAGGAGGCCTTGAAGATCGC
GTTGCTGACGGTCGAGAAGCTCAAGGTCGAGCTGGCGTACCTGCGCCGCATGAAGTACGGCCGCTCCAGCGAGCAGCTGG
CGCACGCGCAGCTCGAACTCGTGGGTGGCCAGGTCGCGCAACCTGCCGCCACGTCCGCAGAGCCCGCGTCTGGCGGTGAC
TGTGGCACACAGGGCAACGTCACGCCCATCGAGCAAGGCCGTCGCAAGCGGCAAGCGCGCGGGCAGGCCAGCGCCCGGGA
CCTGCCGGAGCACTTGCCACGACGCACCGTGCTGCACGCGCCGCAGGGCGGCTGCGACTGCCAGGCCTGCGGTCAAGGCC
TTCGGCAGATCGGCCAGGACGTCTCCGAGGTCCTGGACTACGAGCCAGGCCGCTTCCACGTCGTGCGCCACGTTCGTCCC
AGGCTGGCTTGCAAACGTTGCAGCACGATCACCCAGGCGCCGACGCCAAGCCGTCCCATCGACCGCTGCCTAGCCGGCAC
CGGCCTGCTCACGCACGTGCTGGTCAGCAAGTATTGCGACCACACGCCCCTGTACCGCCTGTGCCAGATCTACGGCCGCG
AAGGCGTGCCGCTGCAGCGCTCCACCCTGGCCGACTGGGTAGCGCAAGCGGCACGCTTGCTGAGCCCGCTGGCCCAAGCG
ATCGGCCGCTATGTGTTGGCGGCCGAGAAGATCCACGGCGACGACACGCCGATCCGCGTGCTCGGCGGCGCCGGCGCGAA
GGCGCGCACAGGGCGCCTGTGGGTGTACGTACGCGACGACCGGGCGAGCGGCGACGCTGCGCCGCCGGCCGTCTGGTTCC
AATACTCGGCCGACCGCAAAGGCGAGCATCCGGTGCGGCACCTGAAGGACTTCAGCGGCATCCTGCAAGCCGATGCCTTC
GCCGGCTACCACCCGCTGTACGAGAGCGGCAAGGTTGTGGAAGCAGCCTGCTGGAGCCATGCACGCAGGAAGATGTGGGA
CATCCACGAACGCCAACACAAGCTGGCTGGGACGTTGGCACACCAGGCACTGCAGCGCATCGGCGTGCTCTTCCAGATCG
AGGCGCAGATCCGGGGCAGGACGGCGCCGGAGCGATGGCGGGCCCGCCAGGAACGCACGCGACCAGCTCTACAAGAGCTC
AGGACTTGGTTGAACGCGACGCTGGCACAGGTCTCGGCGAAGTCGCCCATGGCGATGGCGATCGGCTACACACTGAGCAA
CTGGACCGCGCTCACGCGCTTCGTTGACGACGGCCGCATCGAGGCGCACAACAACGCGGCGGAGCGTGCGTTGAGAGGCG
TCGCGATCGGACGCAAGAACTTCCTGCACCTTGGCTCCGACGCCGGTGGGCGTAGCGCTGCGGTGATCTACACCCTGGTC
GGCTCGGCCAAGCTGTGCGGCGTGGACCCGCAAGCCTACCTGCGCCACGTGCTCGATCGCATTGCCGACCATCCCAGCAA
CCGCCTGGACGAACTCCTGCCGTGGGCGGTGGCCACGCAGTTGGGCCGAGGCGAGCACGTCGGCAAGCCAGCCTCCCAGC
AGGCCGCCTGA

Protein sequence :
MTSQELLALNAVLSGEVQRSQEALKIALLTVEKLKVELAYLRRMKYGRSSEQLAHAQLELVGGQVAQPAATSAEPASGGD
CGTQGNVTPIEQGRRKRQARGQASARDLPEHLPRRTVLHAPQGGCDCQACGQGLRQIGQDVSEVLDYEPGRFHVVRHVRP
RLACKRCSTITQAPTPSRPIDRCLAGTGLLTHVLVSKYCDHTPLYRLCQIYGREGVPLQRSTLADWVAQAARLLSPLAQA
IGRYVLAAEKIHGDDTPIRVLGGAGAKARTGRLWVYVRDDRASGDAAPPAVWFQYSADRKGEHPVRHLKDFSGILQADAF
AGYHPLYESGKVVEAACWSHARRKMWDIHERQHKLAGTLAHQALQRIGVLFQIEAQIRGRTAPERWRARQERTRPALQEL
RTWLNATLAQVSAKSPMAMAIGYTLSNWTALTRFVDDGRIEAHNNAAERALRGVAIGRKNFLHLGSDAGGRSAAVIYTLV
GSAKLCGVDPQAYLRHVLDRIADHPSNRLDELLPWAVATQLGRGEHVGKPASQQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 4e-103 53
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 1e-103 53
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-104 53
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 6e-110 46
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 1e-95 46
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 3e-92 45
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-103 44
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-104 44
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 4e-104 44
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-104 44
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-104 44
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-104 44
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-104 44
tnp AEA34686.1 transposase Not tested Not named Protein 9e-105 44
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-103 44
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 6e-98 44
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 6e-98 44
unnamed AAL08460.1 unknown Not tested SRL Protein 5e-73 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_1738 YP_004487122.1 transposase IS66 VFG0793 Protein 8e-105 44
DelCs14_1738 YP_004487122.1 transposase IS66 VFG1051 Protein 3e-73 41