Gene Information

Name : DelCs14_1495 (DelCs14_1495)
Accession : YP_004486882.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1692282 - 1693265 bp
Length : 984 bp
Strand : +
Note : KEGG: dac:Daci_5117 tyrosine recombinase XerD; TIGRFAM: Tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence : 
ATGTCCCAAGTGCCTGTTGCTTCCATCGCTTCCCCATCGGCTGCCGAAGCCGAATCTGCTGCCGATCCTGCATCCTGGCC
GGCGCCGCTGCCTGCCAGCCTGGATGCGCTGGACCTGTTCATGGATGCGCTGCTGCTGGAGGACGGGCTGTCGCGCAATA
CGCTGGCGGCCTATCGCCGGGATCTGACGGCCTGGGGGCGGTGGCTGGCGCACCAGCAGCCGCCGCTGGCGCTGGATGCG
GCGGGCGAGCTGGAGCTGCAGGGCTATTTCGCGGTGCGGGTGGAGCAGACCAAGGCCAGTTCTTCCAACCGGCGGCTGAC
GGTGCTGCGCCGCTACTACCACTGGGCGCTGCGCGAGCAGCGCATTGCCGCCGATCCCACGGCACGCATGCTGGCGGCCC
GGCAGCCCCCGCGCGTGCCGCATACGCTGACGCAGGCGCAGGTGGAGGCACTGCTCAGGGCGCCCGATGTCGATACGCCA
CTGGGCCTGCGTGACCGTGCCATGCTGGAGCTGATGTATGCCAGCGGCCTGCGCGTGAGCGAGCTGGTGGATCTGCCCTT
GCATGGCATCGATCTGCGCTCGGGCGTGTTGCGCGTGACGGGCAAGGGGCAAAAGGAAAGGCTGGTGCCCTTCGGCCAGG
AGGCGCACTGGTGGCTGGAGCGCTACCTGGCCACGGCGCGCGGTGCCATCCTGGGCGGGCAGCGCAGCGATGCGGTCTTC
GTGACCCAGCGCGGAGCGGCCATGAGCCGCGTGATGTTCTGGGTCATCGTCAAGCGCTGCGCGCAGGTTGCGGGCGTCAC
GGCACCGCTGTCGCCGCACACGCTGCGCCATGCCTTCGCCACCCACCTGCTCAACCATGGCGCAGACCTGCGCGTAGTGC
AGATGCTGCTGGGCCATGCCGACATCTCCACCACCACCATCTACACCCATGTGGCGCGCGAGCGGCTCAAGGCATTGCAC
GCTTTGCACCATCCGCGTGGTTGA

Protein sequence : 
MSQVPVASIASPSAAEAESAADPASWPAPLPASLDALDLFMDALLLEDGLSRNTLAAYRRDLTAWGRWLAHQQPPLALDA
AGELELQGYFAVRVEQTKASSSNRRLTVLRRYYHWALREQRIAADPTARMLAARQPPRVPHTLTQAQVEALLRAPDVDTP
LGLRDRAMLELMYASGLRVSELVDLPLHGIDLRSGVLRVTGKGQKERLVPFGQEAHWWLERYLATARGAILGGQRSDAVF
VTQRGAAMSRVMFWVIVKRCAQVAGVTAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHADISTTTIYTHVARERLKALH
ALHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-57 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-57 56