Gene Information

Name : DelCs14_1416 (DelCs14_1416)
Accession : YP_004486803.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 1601025 - 1602113 bp
Length : 1089 bp
Strand : -
Note : TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: dac:Daci_5199 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding

DNA sequence :
ATGCACCAAGCGCTTGGGCTCGCCGCCCAGGCGCTTTTTCTTTCCTCCCCCAATCCGCGCGTGGGCTGCGTGCTGGTGGC
ACCTTATGGCAGAGTCGTCGGCCAAGGGTTCACTCAGCAGGCTGGCGGCCCACATGCCGAAGTGATGGCACTGCGCGATG
CCGTGGCCCGAGGCGAGGATGTGCGCGGAGCTACCGCCTATGTGACGCTGGAGCCTTGCTCGCACCAGGGCCGTACGGGT
CCCTGCTGCGATGCCCTGATCGCCGCTGGCGTTGCCAAGGTGGTAGGCGCACTGACGGACCCCAATCCCCAGGTCGCCGG
CCAAGGCTTCGCGCGCCTGCGCGCGGCAGGCGTGGATGTGGTGGTGGGGCCGGGTGCAGACGAGTCCCGGGAGCTGAACA
TTGGCTTCTTCAGCCGCATGCTGCGGGGCATACCGTGGGTGCGCATGAAGGCGGCCAGTTCCCTTGACGGGGCGACCGCG
TTGCACAACGGCACCAGCCAATGGATCACATCCCCCGAGGCACGCGCCGATGGCCATGCGTGGCGTGCGAGGGCATGCAC
CATACTGACGGGCATAGGCACGGTGCTGGAAGATGATCCGCGCCTGAACGTGCGGGATGTGGCTACGCCGCGCCAGCCGC
GCATCGCTGTTGTGGACAGCCGGCTGGACATGCCGCTCACAGCCCAGGTACTCCAGGCCCCGGCCGGCTGCCTGATCTAC
ACCAGCAGCCGGGATGCATCGAAAACCAGTGCACTGCAGGACCTGGGCGCGACCGTCATTCCCATGCCCAACGCGCACGG
CAAGGTGGACCTGTGCGCCATGCTGCGTGACCTGGCGGCGCGCGGCACGAACGAGCTGCATGTGGAAGCCGGCTTCAAGC
TCAATGGCTCGCTGGTACGCGAGGGGCTGGTCGATGAGCTGCTGCTGTACCTGGCCCCCAAGCTGCTGGGCACGGGTGGC
ATGGGCATCGCCAGTTTCGGGCCGCTGGACGCGCTGTCCGAGGCCCTTGCATTGGCACTGCATGATGTGCAACGCATCGG
GCAAGACCTGCGCGTTGTGGCCCGCGTTGTGGACCGCGCCAGCTTCTGA

Protein sequence :
MHQALGLAAQALFLSSPNPRVGCVLVAPYGRVVGQGFTQQAGGPHAEVMALRDAVARGEDVRGATAYVTLEPCSHQGRTG
PCCDALIAAGVAKVVGALTDPNPQVAGQGFARLRAAGVDVVVGPGADESRELNIGFFSRMLRGIPWVRMKAASSLDGATA
LHNGTSQWITSPEARADGHAWRARACTILTGIGTVLEDDPRLNVRDVATPRQPRIAVVDSRLDMPLTAQVLQAPAGCLIY
TSSRDASKTSALQDLGATVIPMPNAHGKVDLCAMLRDLAARGTNELHVEAGFKLNGSLVREGLVDELLLYLAPKLLGTGG
MGIASFGPLDALSEALALALHDVQRIGQDLRVVARVVDRASF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 7e-45 44
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 7e-45 44