Gene Information

Name : DelCs14_1390 (DelCs14_1390)
Accession : YP_004486777.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 1574480 - 1575913 bp
Length : 1434 bp
Strand : +
Note : TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: dac:Daci_5225 replicative DNA helicase; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGTCGTCCGTAATGCCCCCGCTCGATCTCGATGATGCGTTCGCACCGCTGCCTGCTGGCGACCAGCAGGTGGCCCAGTT
GCGCGTGCCGCCGCATTCGATGGAGTCCGAGTCCAGCGTTCTAGGGGGGCTGCTGCTGGACAACAACGCCTGGGAGCGTG
TTGGTGATCTGCTGGTGGATGGTGATTTCTACCGCCATGAGCACAAGCTGATCTACGAGGCCATTGGCAAGCTGATCAAC
GGCAGCAAGCCGGCCGACGTGATCACGGTCTACGAGCATTTGCAGAGCATGGGCAAGGCCGAGGAAATCGGCGGCCTGCT
GTACCTGAACCAGCTGGCGCAGTACGTGCCCAGCGCCACCAACATCCGGCGCTATGCGGAGATCGTGCGGGAGCGCTCCA
TCCTGCGCAAACTGGTGACCGCCAGCGACGACATCGCCACCAATGCCTTCAATCCGCAGGGCAAGACGGTCGATCGCATT
CTGGACGAGGCCGAGCAGAAGATCCTGGCCATCGGCGAGGAGGGTGCGCGCAACAAGCAGGGCTTCCAGTCGCTCGACAC
GCTGGTGGTGGACCTGCTGGACCGTGTCCAGGAGATGGCCGACAACCCCATGGACGTGACCGGCGTGCCCACTGGTTTCG
TCGATCTGGACCGCATGACCAGCGGCCTGCAGGCCGGTGACCTGGTGGTGCTGGCTGCCCGTCCCTCGATGGGCAAGACC
TCGTTTGCGGTGAATATCGCCGAGCATGTGGCGCTCAACGAGGGCCTGCCGGTCGCCATTTTCTCGATGGAAATGGGCGC
GGCCCAGCTGGCGGTTCGTATCGTCGGCTCCATCGGCCGCGTCAACCAGGGCAATCTGCGCACGGGCAAGCTCAACGACG
ACGAGTGGCCGCGCCTGACGGAAGCCATCGAGCGACTGCGCACGGTGTCCCTGCACATCGACGAGACACCGGGCCTGTCC
CCCACGGAACTGCGCGCCAATGCGCGGCGCCTGGCGCGCACCTGCGGCAAGCTGGGCCTGATCGTGGTGGACTATTTGCA
GCTGATGAGCGGCTCGGGCTCGGCTGCCAGTTCCGACAACCGTGCGACCGAGCTGGGCGAGATTTCGCGGGGCCTGAAAA
TGCTGGCCAAGGAACTGCAGTGCCCGGTGATTGCCCTGTCCCAGCTCAACCGCTCGGTGGAGCAGCGCACCGACAAGCGT
CCCATGATGTCCGACCTGCGCGAATCGGGCGCCATCGAGCAGGATGCCGACATCATCATGTTCATCTACCGTGATGACTA
CTACAACAAGGACAGCAAGGAGCCGAACATTGCCGAAGTCATCATCGGCAAGCAGCGTAACGGTCCCACGGGAACGGTGA
AGGTGTTCTTCCAGAAGAACCAGACGCGCTTCGAGAACCTGGCCGTGGGCTACGGTGGCGGCGACGAGTACTGA

Protein sequence :
MSSVMPPLDLDDAFAPLPAGDQQVAQLRVPPHSMESESSVLGGLLLDNNAWERVGDLLVDGDFYRHEHKLIYEAIGKLIN
GSKPADVITVYEHLQSMGKAEEIGGLLYLNQLAQYVPSATNIRRYAEIVRERSILRKLVTASDDIATNAFNPQGKTVDRI
LDEAEQKILAIGEEGARNKQGFQSLDTLVVDLLDRVQEMADNPMDVTGVPTGFVDLDRMTSGLQAGDLVVLAARPSMGKT
SFAVNIAEHVALNEGLPVAIFSMEMGAAQLAVRIVGSIGRVNQGNLRTGKLNDDEWPRLTEAIERLRTVSLHIDETPGLS
PTELRANARRLARTCGKLGLIVVDYLQLMSGSGSAASSDNRATELGEISRGLKMLAKELQCPVIALSQLNRSVEQRTDKR
PMMSDLRESGAIEQDADIIMFIYRDDYYNKDSKEPNIAEVIIGKQRNGPTGTVKVFFQKNQTRFENLAVGYGGGDEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 3e-91 50
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 5e-78 44
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 5e-78 44
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-76 44
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-79 43
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-79 43
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-78 42
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 3e-77 41