Gene Information

Name : DelCs14_1210 (DelCs14_1210)
Accession : YP_004486597.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 1371070 - 1371786 bp
Length : 717 bp
Strand : +
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: Lipoprotein releasing system, ATP-binding protein; KEGG: dac:Daci_5400 lipoprotein releasing system ATP-binding protein; PFAM: ABC transporter-like

DNA sequence : 
ATGAATGAAGTGAATGTGATGCCCGGTTTCGAAGTGTCCCAGCAGGGCGCCGTGGTCCTGGATGCGCGCGGCCTGACCAA
GCGCTTTGCCGAAGGCCGGCTCAACGTGCAGGTGCTGGCAGGTGTCGATCTGCAGGTGCGTGCGGGCGAGACGCTGGCCA
TTGTCGGCGCCTCGGGCTCGGGCAAGAGCACGCTGCTGCACCTGCTAGGCGGGCTGGACGCTCCCACCAGCGGCAGTGTC
ACCCTCAAGGGCGAGCCCCTGCATGAACTCAGCGCCCAGAAGCAGGGTGCGCTGCGCAACAGGCACCTGGGCTTCATCTA
CCAGTTCCACCATCTGCTGCCCGAATTCAGCGCCCAGGACAACGTGGCCATGCCGCTGCGCATACGCCGCGACGACAGGG
CCGAGTGCATGGAGCGCGCCGCACGCATGCTGGCGGCCGTGGGCCTTGGCGAACGCATGCTGCACCGTCCGGCCGAACTG
TCGGGGGGCGAGCGCCAGCGCGTGGCCATTGCCCGCGCCCTGGTCACCCAGCCGGCCTGCGTGCTGGCCGACGAGCCCAC
GGGCAACCTGGACCGCAGCACGGCCGACACCGTGTTCCGTCTGATGCTGGAGCTGGCGCGCAGCCATGGCACGGCCTTCG
TCATGGTCACCCACGATGAGCAGCTGGCGGCGCGCTGCGACCGCATGGTGCGCCTGGTGCAGGGCCAATTGGCCTGA

Protein sequence : 
MNEVNVMPGFEVSQQGAVVLDARGLTKRFAEGRLNVQVLAGVDLQVRAGETLAIVGASGSGKSTLLHLLGGLDAPTSGSV
TLKGEPLHELSAQKQGALRNRHLGFIYQFHHLLPEFSAQDNVAMPLRIRRDDRAECMERAARMLAAVGLGERMLHRPAEL
SGGERQRVAIARALVTQPACVLADEPTGNLDRSTADTVFRLMLELARSHGTAFVMVTHDEQLAARCDRMVRLVQGQLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_1210 YP_004486597.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 2e-32 46
DelCs14_1210 YP_004486597.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 7e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_1210 YP_004486597.1 lipoprotein releasing system, ATP-binding protein VFG2059 Protein 2e-15 42