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Name : DelCs14_1122 (DelCs14_1122) Accession : YP_004486509.1 Strain : Delftia sp. Cs1-4 Genome accession: NC_015563 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1271749 - 1273491 bp Length : 1743 bp Strand : - Note : TIGRFAM: ATPase, type IV, pilus assembly, PilB; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: dac:Daci_5488 type IV-A pilus assembly ATPase PilB; SMART: ATPase, AAA+ type, core DNA sequence : ATGGCTGTTGCTGACTCCTCGCTCAAGAATGCTTCCGCTGTTGCATCGCTTCCCGGTATCGGGCGAGCCCTGATATCAGC AGGCAAGGTGTCGCAGCAGGCAGCGGAAGCCGCCGCCAGCAAGGCCGGCGCCAACCGCACCTCGTTCATTGCCGAGTTGA GCAACGCAGGCATCCTCTCAGCCCTGGAAGTGGCCGAGACGGTCTCCACCATGTTCAGCGCGCCGCTGCTCGATCTTGAT GCCATCAACGCCGCGCGCCTGCCGCATGAGTTGCTGGACGCCAAGATCATCAGCTCCTATCGCGTCCTCCCCTTGAGCAA GCGAGGCAACCGCATCACGGTGGCCACGGCCGACCCGACACAGCAGGAAGCTGCAGAGCAGATCAAGTTCACCACCCAGC TAGGCGTGGATTGGATCATCGTCGAAGCCGACAAGCTGGAACGCCTGATAGCTCAGCAGAGCAAAAGCGCCAGCGAAACC ATGGAGAGCTACAGCGGAGGCGGCGATTTCGAGTTCGGCGACCTCAAGCCCGACGAGGTTGCCGAGGAAAAGGACAACAC GGCGGCAACGGAAGTCGAGGACGCGCCCATCGTCAAGTTCCTGCACAAAATGCTGCTCGACGCCTTCAACATGCGCGCGT CGGACCTGCATTTCGAGCCTTACGAACATCAGTACCGCGTACGCTTCCGGATTGACGGCGAGTTGCGTGAGATTGCATCG CCCCCCATTGCGATCAAGGAGAAGCTGGCCTCGCGCATCAAGGTGATCTCGCGCATGGACATCTCGGAAAAGCGGGTTCC GCAAGACGGGCGCATGAAGCTCAAGGTGGGTCCGGACCGCGTCATCGATTTTCGCGTGAGCACCCTGCCCACGCTCTTTG GCGAGAAGATCGTGATCCGTATTCTGGACCCGAGCTCGGCCAAGATGGGCATTGATGCCCTGGGCTACGAACCCGAGGAA AAGGCACGCCTGCTTGAAGCCATCGGGCGCCCCTACGGAATGATTCTGGTGACAGGCCCCACCGGCTCGGGCAAGACGGT GTCGCTGTACACCTGCCTGAACATGCTGAACAAGGCCGGGGTGAACATCGCGACGGCAGAAGACCCCTCGGAAATCAACC TGCCCGGCGTCAACCAAGTCAACGTGAACGAAAAGGCAGGCCTCACCTTTGCGACGGCGCTGAAGGCCTTCCTGCGCCAG GATCCCGACATCATCATGGTCGGTGAAATCCGCGACCTGGAAACCGCCGACATCTCGATCAAGGCCGCGCAGACCGGCCA CTTGGTGCTGTCCACGCTGCACACCAACGACGCACCGACCACATTGACGCGCATGCGCAACATGGGCATTGCCCCCTTCA ACATCGCATCGAGCGTGATCCTGATCACCGCCCAGCGGCTGGCCAGGCGCCTGTGCCCCCAGTGCAAGGAGCCTGCGGAT ATCCCGCGGGAGGCGCTGCTGGAGGCGGGCTATGACGAGGCGGACATCGACGGTAGCTGGGTCACCTACAAGCCCGTGGG CTGCCAGGCATGCAACAACGGCTACAAGGGACGCGTCGGCATCTACCAGGTGATGCCGATCAGCGAGGAAATCCAGCGCA TCATCCTGCAAGACGGCAGCGCGCTGGAGATCGCGGCACAAGCCAAGCGTGAAGGCGTGCGGTCTCTGCGCGGATCCGGA CTGCACAAGGCCAGACTAGGACTGACCTCACTCGAAGAAGTGCTGGCAGTTACCAATGAGTAA Protein sequence : MAVADSSLKNASAVASLPGIGRALISAGKVSQQAAEAAASKAGANRTSFIAELSNAGILSALEVAETVSTMFSAPLLDLD AINAARLPHELLDAKIISSYRVLPLSKRGNRITVATADPTQQEAAEQIKFTTQLGVDWIIVEADKLERLIAQQSKSASET MESYSGGGDFEFGDLKPDEVAEEKDNTAATEVEDAPIVKFLHKMLLDAFNMRASDLHFEPYEHQYRVRFRIDGELREIAS PPIAIKEKLASRIKVISRMDISEKRVPQDGRMKLKVGPDRVIDFRVSTLPTLFGEKIVIRILDPSSAKMGIDALGYEPEE KARLLEAIGRPYGMILVTGPTGSGKTVSLYTCLNMLNKAGVNIATAEDPSEINLPGVNQVNVNEKAGLTFATALKAFLRQ DPDIIMVGEIRDLETADISIKAAQTGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCPQCKEPAD IPREALLEAGYDEADIDGSWVTYKPVGCQACNNGYKGRVGIYQVMPISEEIQRIILQDGSALEIAAQAKREGVRSLRGSG LHKARLGLTSLEEVLAVTNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-79 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-79 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DelCs14_1122 | YP_004486509.1 | type IV-A pilus assembly ATPase PilB | VFG0233 | Protein | 3e-133 | 54 |
| DelCs14_1122 | YP_004486509.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 1e-143 | 52 |
| DelCs14_1122 | YP_004486509.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 1e-135 | 50 |
| DelCs14_1122 | YP_004486509.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 9e-82 | 46 |
| DelCs14_1122 | YP_004486509.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 7e-80 | 43 |
