Gene Information

Name : Mar181_0792 (Mar181_0792)
Accession : YP_004480766.1
Strain : Marinomonas posidonica IVIA-Po-181
Genome accession: NC_015559
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 877363 - 878739 bp
Length : 1377 bp
Strand : +
Note : KEGG: psp:PSPPH_0580 replicative DNA helicase; TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal

DNA sequence :
GTGCAATTAGATGATTCTGAAGTGGCTTCTATTAAGTTGCCTCCCTATTCGGTAGAAGCTGAACGTTCTGTCGTTGGCGG
TTTGATGTTGGACCCGCAGGCTTGGGAAAAAGTGTCCGAGCTGGTTATTGCTGATGATTTTTATCGACCTGAGCATAAGT
TAATCTTCGCGGTAATTGCTCGGTTGGCTGATGAGTCTGAGCCGGTCGATGTCGTGACCATTGGTGAGCGCCTAGACAAG
CGAGGTGATTTGGAATCAATTGGTGGAATGGCTTATCTGATTGAGGTAGCCGAAGCGACCCCCAGTGCGTCCAACATTGC
CTCATATGCGGACATTGTGCGTGAGCGTTCGATCTTACGCCGTTTGATTTCAACCACCAATGACATTTCCTCTCGTGCTT
TTCATCCTGAAGGGATGACAGCAGCAGAAGTATTGGATGAAGCGGAACGTAAGATTTTTCAAATTGCCGAAGGCGGTGAA
AAGAAAGGTGGACCAAGAATTGCTTCTGATATCTTGAGTGCGACTGTTGATAAAATCGATGAGCTTTATCATCAAGATGG
TGCGATTACAGGGTTGAGTACAGGGTTTACCGATTTGGATGCCATGACCGCAGGATTACAACCAGCTGATTTGGTTATTG
TGGCGGGTCGTCCCTCTATGGGTAAAACCACCTTCGCAATGAATTTGGTCGAAAATGCCGCGATGATCAGTGACCTTCCT
GTAATTGTTTTCAGTTTGGAGATGCCTTCAGAGTCGTTGATGATGCGTATGTTGTCATCGCTGGGGCGAATTGATCAAAC
GCGCATGCGTTCGGGCCAATTGATCCAAGAAGATTGGGACAAATTGATGTCAGCGGTGAAGATGCTGAAGGATCGGAAGT
TATTCATTGATGATACGGGTGGCATTAGCCCGACTGAAATGCGATCACGGGTTCGCCGTATTGCCCGAGAGCATGGTGGT
GTGGCCCTTATCATGGTCGATTACCTTCAATTGATGCAGATTCCTGGCTTTACTGAAGGTCGAACGAACGAGATTTCTGA
AATATCACGATCCCTTAAGGCCATTGCGAAAGAAATGGACTGTCCTATGGTGGCATTGTCCCAGCTAAACCGTAGTTTGG
AGAACCGACCCAATAAGCGCCCAGTCAACTCGGACTTGCGTGAATCCGGAGCGATTGAGCAGGATGCGGATGTGATCTCC
TTTGTATACCGTGACGAAGTGTACCACGAAGATACGCCACATAAAGGGATTGCAGAAATCATTATTGGTAAGCAGCGTAA
TGGTCCGATAGGTACTTGTCGTTTGGCTTTTGTGGGTAAATATACTCGTTTTGAAGATTTGGCGCCGGATGCTTACCGTG
ATTTTGATGACGAATAA

Protein sequence :
MQLDDSEVASIKLPPYSVEAERSVVGGLMLDPQAWEKVSELVIADDFYRPEHKLIFAVIARLADESEPVDVVTIGERLDK
RGDLESIGGMAYLIEVAEATPSASNIASYADIVRERSILRRLISTTNDISSRAFHPEGMTAAEVLDEAERKIFQIAEGGE
KKGGPRIASDILSATVDKIDELYHQDGAITGLSTGFTDLDAMTAGLQPADLVIVAGRPSMGKTTFAMNLVENAAMISDLP
VIVFSLEMPSESLMMRMLSSLGRIDQTRMRSGQLIQEDWDKLMSAVKMLKDRKLFIDDTGGISPTEMRSRVRRIAREHGG
VALIMVDYLQLMQIPGFTEGRTNEISEISRSLKAIAKEMDCPMVALSQLNRSLENRPNKRPVNSDLRESGAIEQDADVIS
FVYRDEVYHEDTPHKGIAEIIIGKQRNGPIGTCRLAFVGKYTRFEDLAPDAYRDFDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-102 53
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 4e-87 50
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-88 50
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 8e-89 50
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-88 49
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-86 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 5e-81 43
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 5e-81 43
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 3e-68 42