Gene Information

Name : Mar181_3472 (Mar181_3472)
Accession : YP_004483407.1
Strain : Marinomonas posidonica IVIA-Po-181
Genome accession: NC_015559
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 3820457 - 3822538 bp
Length : 2082 bp
Strand : +
Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: pfs:PFLU6003 ATP-dependent DNA helicase RecG; SMART: DEAD-like helic

DNA sequence :
ATGATAGATGGATTAGACACACAGGATGTCCGAGAATTAAAAGGCGTGGGAGAGGCAATGGCGGAGAAACTCGCTAAAAT
GCATCTTCATACCGTACAGGATTTGCTCTTCCATCTTCCCATTCGCTATCAAGATAGGACCCGGATTGTGCCCATTGGGC
AACTTGGGTTTGGTGACGAAGCGGTCATTGAAGGCCAAGTCATAAGCTGCGAAGTCAAAATGGGCAAGAGGCGCAGTTTA
TTATGTCGCCTCAAAGATCACTCTGGCAGTGTCTGTCTCCGCTTCTTTCACTTTTCAGCCGCGCAAAAAAAGCAGCTGGA
ATCCGGTAATCGAGTACGCTGTTTTGGCGAAATTCGTCGTGGGAGTGCCGGTTTTGAAATGTACCACCCTGAATATAAAC
TGATTGAAGAGAATGCCGCGCCTCTAGAATCGTCTCAACTAACGCCTATTTACCCACTGACGGAAGGTTTGACCCAAACC
AAAATTCGGCAACTATGTGAACAAGCATTAGAGCGGCTTACACCTTACAACTTGCAAGAATGGTTACCTGACGAGCTGCG
TAACCAATTTAGTTTACCTTCTCTGAATGAGGCCATTCAATTTCTGCATCATCCGTCACGAGATGCAGATCTGGAATCGC
TCAAGCAAGGACATCATCCTGCACAATATCGATTGTCGTTCGAAGAGTTAATGGCACATCAGTTATCTTTAATTGGTAAG
CGGGTAAAAGCCAAACAAGACAAGAGTGTCAAAGTCTCCGAGGCTGGGGCGCTTAGCGAACAACTGTTAGCACAATTACC
TTTCACGCCCACTCAAGCCCAGCAGCGCGTATTCAGTGAAATCCTTAAGGATTTATCGACGGGGCACCCCATGCTACGTC
TTGTACAAGGCGACGTGGGGTCAGGTAAAACACTCGTAGCAGCCCTAGCGGCGGCGGCTGTAGTGCAAGCCGGTTACCAA
GTGGCCGTGATGGCGCCAACTGAAATTCTTGCTGAGCAACATTATGCGAACTTCACTCAGTGGTTTCAGCCACTCGGCTT
ACAGGTCGCTTGGATGACCGGCAAACTCAAGGGCAAAACCCGAGAACAAGAGCTCAAGCTCATTGCCTCAGGGCAAGCAC
AGATTGTGGTCGGTACCCACGCGTTATTTCAAGAAACCGTTGAGTTTGACCGTTTAGCGCTGGCCATCATAGATGAACAG
CATAGATTCGGGGTACATCAACGCATGGCCTTGCGAGAAAAAGGCATGAAACAAGGCGTTCAGCCTCACCAGCTCATCAT
GACAGCGACGCCCATTCCTCGGACACTGGCCATGTCAGCTTATGCCGATTTGGATTGTTCTATTATCGATGAACTCCCGC
CTGGTCGCACGCCCGTCAACACCATAGTCGTGTCGGATCAACGTCGCCAAGAAGTGATTGAACGAGTAAAAAGCGCCTGT
CAGGAGGGCAAACAGGCTTACTGGGTATGTACTTTAATTGAAGAGTCCGAAGCCCTACAATGCCAAGCCGCCGAAGATAC
TGCTTTGCTATTGCAAGAGCAGTTGTTTGGTTTGCGCATTGGTCTAGTTCATGGTCGCTTAAAAGCACAAGAAAAAGCCG
ATATTATGGCGCAATTTAAAGCAGGCGAAATTCAACTGCTCGTCGCCACCACCGTTATTGAAGTGGGTGTGGACGTACCA
AATGCCAGCTTGATGGTTATTGAAAATCCAGAACGCCTCGGTTTGGCTCAGCTGCATCAATTGCGAGGCCGTGTTGGACG
AGGACAAGCTGCCAGTCATTGCGTCCTGCTCTACAAAGCCCCTCTTGGACAACAGGGTAAAGCACGCTTATCGACTATGA
GAGAAACCAGTGATGGTTTCAAAATCGCGGAAAAGGATTTAGAGCTAAGAGGGCCAGGAGAGCTTTTAGGCACCCGACAA
ACAGGTTTATGGGAGTTCAAAGTAGCCGATTTGCAGAGAGATAAAGCCTTGTTAGACGATGTGCAACGTGCCGCAGGATT
ATTGCATCAGAACTTCCCTGATCACATACCACCTTTATTAAGCAGATGGCTGCCGAATCATGACCAATATTTAAATGTCT
GA

Protein sequence :
MIDGLDTQDVRELKGVGEAMAEKLAKMHLHTVQDLLFHLPIRYQDRTRIVPIGQLGFGDEAVIEGQVISCEVKMGKRRSL
LCRLKDHSGSVCLRFFHFSAAQKKQLESGNRVRCFGEIRRGSAGFEMYHPEYKLIEENAAPLESSQLTPIYPLTEGLTQT
KIRQLCEQALERLTPYNLQEWLPDELRNQFSLPSLNEAIQFLHHPSRDADLESLKQGHHPAQYRLSFEELMAHQLSLIGK
RVKAKQDKSVKVSEAGALSEQLLAQLPFTPTQAQQRVFSEILKDLSTGHPMLRLVQGDVGSGKTLVAALAAAAVVQAGYQ
VAVMAPTEILAEQHYANFTQWFQPLGLQVAWMTGKLKGKTREQELKLIASGQAQIVVGTHALFQETVEFDRLALAIIDEQ
HRFGVHQRMALREKGMKQGVQPHQLIMTATPIPRTLAMSAYADLDCSIIDELPPGRTPVNTIVVSDQRRQEVIERVKSAC
QEGKQAYWVCTLIEESEALQCQAAEDTALLLQEQLFGLRIGLVHGRLKAQEKADIMAQFKAGEIQLLVATTVIEVGVDVP
NASLMVIENPERLGLAQLHQLRGRVGRGQAASHCVLLYKAPLGQQGKARLSTMRETSDGFKIAEKDLELRGPGELLGTRQ
TGLWEFKVADLQRDKALLDDVQRAAGLLHQNFPDHIPPLLSRWLPNHDQYLNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-112 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mar181_3472 YP_004483407.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 64