Gene Information

Name : Mar181_3440 (Mar181_3440)
Accession : YP_004483375.1
Strain : Marinomonas posidonica IVIA-Po-181
Genome accession: NC_015559
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 3788422 - 3789141 bp
Length : 720 bp
Strand : -
Note : PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: maq:Maqu_0548 ribonuclease PH

DNA sequence :
ATGCGCCCAAGTGGAAGAGCCGTTGATCAGTTACGTCCCCTTAAAATTACGCGAAATTTTACCAAACATGCCGAAGGTTC
CGTGTTAATTGAATGTGGTGATACCAAAGTCATTTGTACGGCAACGGTTGTACCAGGCGTTCCTCGTTTTTTGAAGGGCA
AGGGTCAGGGTTGGATCACAGCGGAATACGGTATGCTACCTCGTTCAACAGGCAATCGTATGGACCGCGAAGCGGCACGT
GGTAAGCAAGGTGGCCGTACGGTTGAGATCCAACGTTTGATTGGTCGTTCGTTGCGTGCCGCGGTGGATTTGAAGAAGCT
GGGTGAGCATACTATTACGATTGATTGTGATGTGATTCAAGCAGACGGTGGCACGCGTACTGCTTCCATCACGGGGGGGT
TTGTGGCCCTAGCCGATGCCATGCGTCATCTTGTTGAGAAGAAAAAGGTCAAAGAAAATCCAATTGTTTCTCAGATCGCT
GCGATTTCAGTGGGTGTTTACAAAGGCACGCCAGTGTTGGATTTGGATTACCCAGAAGATTCCAATGCAGAAACCGACAT
GAACGTCATTATGAATGACAAAGGTGGTTTTATTGAAATCCAAGGTACCGCAGAAGGCGAGGCCTTTGGTGACGAACACA
TGATGGGCATGTTGGCGGTGGCTCGTAAAGGCATCGCCGAAATCATTGAGCTTCAACGCGCCGCCTTGTTTGATAAGTAA

Protein sequence :
MRPSGRAVDQLRPLKITRNFTKHAEGSVLIECGDTKVICTATVVPGVPRFLKGKGQGWITAEYGMLPRSTGNRMDREAAR
GKQGGRTVEIQRLIGRSLRAAVDLKKLGEHTITIDCDVIQADGGTRTASITGGFVALADAMRHLVEKKKVKENPIVSQIA
AISVGVYKGTPVLDLDYPEDSNAETDMNVIMNDKGGFIEIQGTAEGEAFGDEHMMGMLAVARKGIAEIIELQRAALFDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-63 58