Gene Information

Name : Mar181_3003 (Mar181_3003)
Accession : YP_004482949.1
Strain : Marinomonas posidonica IVIA-Po-181
Genome accession: NC_015559
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 3319117 - 3319884 bp
Length : 768 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: pmu:PM0128 iron-dicitrate transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGTCACTTAGTACTCGACACTTATCGGTTGGCTATCATCAAAAAGCCATTGTGAAACACATCGACTTAGATTTACCTGA
AGGCAAAATCATCGCCTTACTAGGCCCAAATGGTTGTGGTAAATCCACTCTGTTAAAAGCCTTAGCTCGCTTATTAACCC
CTATGCAAGGTGAGGTTCAATGGCAAGGTAAAGCTTTACATAAGATTCCCTCAAAACAATTGGCCAGACAACTCGCGCTG
TTACCACAAACTCAGCCGATTCCAGAAGGCATTAAAGTAAAAGACTTAATCGCCTATGGTCGCAGCCCCTATACAGGATT
CTGGGGAAAAACCAATCAAGCTGATCAAGATATCATCCATCAGGTCATGCAAGAAACAGGTACATCCGAACTGGCAGAAC
AATTGGTCAGTGAGCTGTCCGGAGGCCAACGTCAACGTGTTTGGCTGGCCATGACACTGGCGCAAGATACGCCTTATCTG
TTGCTCGATGAACCGACGACCTATATGGACCTCAACCATCAAGTTGAACTCATGCATCTACTGCGACGCCTTAATCAACA
AGGCAAAACCATCATTACAGTCTTGCATGACATTAACCAAGCCGCCCGTTACTGTGATCATCTAATTGTGATGAAAGAAG
GGCAAATCATTCAACAAGGCGTACCATCCGACGTCCTTACTCGAGAATTGCTAAAGTCCGTCTTCTCACTGGAGGCGCAA
ATTCATCAGGACCCTATCGCCAAAACTCCTATGTGTGTGGTGGAATAA

Protein sequence :
MSLSTRHLSVGYHQKAIVKHIDLDLPEGKIIALLGPNGCGKSTLLKALARLLTPMQGEVQWQGKALHKIPSKQLARQLAL
LPQTQPIPEGIKVKDLIAYGRSPYTGFWGKTNQADQDIIHQVMQETGTSELAEQLVSELSGGQRQRVWLAMTLAQDTPYL
LLDEPTTYMDLNHQVELMHLLRRLNQQGKTIITVLHDINQAARYCDHLIVMKEGQIIQQGVPSDVLTRELLKSVFSLEAQ
IHQDPIAKTPMCVVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-69 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 8e-59 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 8e-59 49
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-55 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-55 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-55 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-55 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-54 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-55 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-48 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-48 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-48 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-48 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mar181_3003 YP_004482949.1 iron-chelate-transporting ATPase BAC0164 Protein 5e-69 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mar181_3003 YP_004482949.1 iron-chelate-transporting ATPase VFG1042 Protein 5e-69 51
Mar181_3003 YP_004482949.1 iron-chelate-transporting ATPase VFG0925 Protein 2e-54 45