Gene Information

Name : Mar181_0268 (Mar181_0268)
Accession : YP_004480254.1
Strain : Marinomonas posidonica IVIA-Po-181
Genome accession: NC_015559
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 294213 - 295358 bp
Length : 1146 bp
Strand : +
Note : TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: tgr:Tgr7_1559 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding

DNA sequence :
ATGATGCATAACCACGAATATTGGATGGCCAAAGCGCTGCAACTCGCTCAAAAAGGCCTGTTTACCACACACCCAAACCC
AAGAGTGGGCTGCGTGCTGGTGAAACAAGATGAATTGATTGGACAAGGTTACCACGAGAAAGCCGGTGAAGGTCATGCTG
AAGTCAATGCTTTAGCGGATGCCAAGCAAGATGTTAGCGGTGCGACCGCGTATGTCACTTTAGAGCCTTGCAGTCATCAG
GGCAAAACACCGCCTTGTGCTGACGCACTGATTAAAGCGGGAGTGGCTTGTGTTGTGTATGGCTTGCAAGATCCGAATCC
GGAGGTGGCGGGCAATGGCTTGGCGAAACTCAAAGCCGCTGGAATAGAGGTCATCGGGCCCATCCTAGAAGCCGAATGTA
ACGCTTTAAACCCAGGCTTCAATAAACGCATGCGCGAAGGCTTACCCTTTGTTCGAGTGAAATTGGCCATGAGTCTAGAT
GGTCGAACGGCCATGGAATCCGGTGAAAGTCAGTGGATTACAGGGGGCGATGCGCGCTTGGATGTACAGAAATGGCGTGC
TCAAAGTGATGCAATTGTAACGGGCATTGGGTCGGTATTAGCCGATAACCCCAGTATGACAGTACGCATTGATGAACAAG
GTCAGGAAGTCGATGCCAAGACGGTTCGTCAACCTTTGCGTGTCATTATGGACACGGCGCTTTCTGTTCTGCCGGAAGCA
AAAATTCTCTACCCTAGTTCACAGGCATGTGTATTTGCCATTGAAGAGGAAGTGGAAGCCGAGCATTTGGAGACATTGCA
GCAAAAAGGTGTGCAGGTGAAATTTTCGTCACCCGGAGACGATGGTCGCTTGGATCTGGTTGATGCCATGGAACAATTGG
CGGATATGGGCATTAATGAGGTTTTGCTGGAAACTGGCGCCGAGCTAGCAGGTGGTTTTTTACAGGCAGGCTTGATTGAT
GAAATCATTGTGTATATGGCACCAAAATTACTGGGTTCCAATGCTCGTGCCTTATTTCAGCTACCCTTAGAGGTGATGGC
GGATGCGGTAGATTTGCAATTAAAGTCTGTGCGTCAGGTGGGGCAAGATCTTCGCTTGGTGTATCAACCGGTTTATCTTG
ATGAGTCAGAAGACCAGCAAGAATGA

Protein sequence :
MMHNHEYWMAKALQLAQKGLFTTHPNPRVGCVLVKQDELIGQGYHEKAGEGHAEVNALADAKQDVSGATAYVTLEPCSHQ
GKTPPCADALIKAGVACVVYGLQDPNPEVAGNGLAKLKAAGIEVIGPILEAECNALNPGFNKRMREGLPFVRVKLAMSLD
GRTAMESGESQWITGGDARLDVQKWRAQSDAIVTGIGSVLADNPSMTVRIDEQGQEVDAKTVRQPLRVIMDTALSVLPEA
KILYPSSQACVFAIEEEVEAEHLETLQQKGVQVKFSSPGDDGRLDLVDAMEQLADMGINEVLLETGAELAGGFLQAGLID
EIIVYMAPKLLGSNARALFQLPLEVMADAVDLQLKSVRQVGQDLRLVYQPVYLDESEDQQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-62 49
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-62 49