Gene Information

Name : STP_0567 (STP_0567)
Accession : YP_004478687.1
Strain : Streptococcus parauberis KCTC 11537
Genome accession: NC_015558
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 609094 - 609804 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence : 
GTGACTGATGAAAAAACGATACTTATACAATTGAAAGATATTGTCAAAAGTTATAAAAATGGAGACCAGAAACTCCAAGT
CTTAAAAGGTATAGATTTGACAGTACATGAAGGAGAATTTCTAGCAATAATGGGACCTTCTGGATCTGGAAAATCAACTT
TGATGAATATTATTGGTTTGCTAGATAGACCTACGAGTGGTGACTATCTACTTAATGGAAATGAAGTAGATAAATTAAAT
GATCGAAAGTTAGCTCAAGTACGTAATGAGGAAATCGGGTTTGTATTTCAACAGTTTTTCTTGCTTTCTAAGTTAACAGC
TTTACAAAATGTAGAACTTCCACTTATTTACGCTGGAGTTGGACTGTCAAAAAGAAAAGAATTGTCTAAATTATATTTAG
AAAAAGTGGAATTGTCGACTCGGATGAAACATTTACCATCTGAATTATCTGGTGGGCAAAAACAGCGTGTAGCTATAGCT
AGAGCTCTGGTTAACACCCCATCAATAATTTTAGCAGATGAGCCAACTGGTGCCTTAGATACTAAAACAGGTGAGCAAAT
AATGGATTTATTAACCGAACTTAACAAAGAAGGTAAGACAATTATTATGGTAACCCATGAACCTGATATAGCTGACTTTG
CAACACGAAAAATTGTTATTCGTGATGGTGAAATTACCGCAGACACTACTGATAGTGTTCGAATTGAATAG

Protein sequence : 
MTDEKTILIQLKDIVKSYKNGDQKLQVLKGIDLTVHEGEFLAIMGPSGSGKSTLMNIIGLLDRPTSGDYLLNGNEVDKLN
DRKLAQVRNEEIGFVFQQFFLLSKLTALQNVELPLIYAGVGLSKRKELSKLYLEKVELSTRMKHLPSELSGGQKQRVAIA
RALVNTPSIILADEPTGALDTKTGEQIMDLLTELNKEGKTIIMVTHEPDIADFATRKIVIRDGEITADTTDSVRIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-34 42
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 6e-33 42
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STP_0567 YP_004478687.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-83 75
STP_0567 YP_004478687.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-45 48
STP_0567 YP_004478687.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-40 46
STP_0567 YP_004478687.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-37 41