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Name : cipE (STP_1116) Accession : YP_004479236.1 Strain : Streptococcus parauberis KCTC 11537 Genome accession: NC_015558 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1193866 - 1196154 bp Length : 2289 bp Strand : + Note : - DNA sequence : ATGCTCTGTCAGAATTGTCAATTAAATGAAGCTTCAATCCATTTATATACCAATGTTAATGGGAAACAAAAGCAAATTGA TTTATGTCAAAATTGCTATCAAATAATGAAAACGGATGCGAATAATTCAATATTAGGGGGAATTGGTTCGCGTTCAGAAA AAAAACAAGACCCAATGAATCCATTCTTTGATGACTTTTTCGGTGATTTGAATAACTTTCGATCTTTCGGAAATCTACCT AATACACCTCCAACTCAGGCAGGTGGAAACAACGGTGGAAATAATGGGAAAATTCCTAACCAACAGGGCTCTCGTAATCA AAATGCACAAGCTACTCAACAGCCTAAAGGCTTACTAGAAGAGTTTGGTATCAATGTTACGGAAATTGCCCGTAAAGGAG GTATTGACCCTGTTATAGGTCGTGACGAAGAGATTACACGTGTCATTGAAATTCTCAATCGTCGTACAAAGAATAATCCA GTTCTAATTGGCGAACCCGGTGTTGGTAAAACTGCTGTCGTTGAAGGTTTAGCTCAAAAAATTGTGGACAGTGATGTCCC ATATAAACTTCAAGGTAAACAAGTGATTCGTTTAGATGTTGTTAGTTTAGTCCAAGGAACTGGAATCCGTGGTCAATTTG AAGAACGAATGCAAAAACTGATGGAAGAAATAAGAAACCGTCAAGATGTTATCTTATTCATTGATGAAATTCACGAAATT GTTGGAGCCGGTAATGCAGGTGATGGCAACATGGACGCTGGAAATATCTTAAAACCTGCACTTGCTCGTGGTGAATTACA GTTAGTTGGTGCTACTACACTTAATGAGTATCGAATTATTGAGAAAGATGCCGCCTTAGAACGACGTATGCAACCTGTTA AGGTTGATGAGCCTTCTGTTGAAGAAACAATTACCATCTTAAAAGGGATCCAGACTAAGTACGAAGATTATCATCATGTT AAGTATACAGATGATGCTATCATTGCTGCTGCGACACTTTCTAATCGATATATTCAAGATCGCTTCCTTCCAGACAAAGC AATTGACTTACTCGATGAAGCCGGCTCAAAATTGAACTTGACGTTAACTTTTGTTGATCCAAAAGAAATAGATCAACGTC TTGTCGAAGCCGAAAACTTAAAAGCGCAGGCTACACGAGATGAAGACTATGAGCGCGCAGCTTATTTCCGCGACCAAATT ATCAAATATAAAGAGTTACAAAAGCAAAAAGTTGATGAAGAAGATACCCCAATCATTACTGAGAAAACAATTGAAGATAT CTTAGAGGACAAAACCAATATCCCTGTGGGTGATTTGAAAGAAAAAGAACAATCACAATTGATTCACCTGGCTGAAGATT TGAAGAGTCATGTCATTGGTCAAGACGATGCTGTTGATAAAATTGCTAAAGCTATTCGTCGTAACCGGGTCGGTCTAGGT ACGCCAAATCGACCAATCGGTTCATTCTTATTCGTGGGTCCTACAGGTGTAGGGAAAACTGAGTTATCTAAGCAATTAGC AATTGAACTTTTTGGTACAGCCGATAATATGATTCGTTTTGATATGTCAGAGTACATGGAGAAACATGCCGTTGCTAAGT TGGTTGGTGCCCCTCCTGGCTATGTCGGATATGAGGAAGCCGGTCAATTAACGGAAAAAGTCCGTCGCAATCCTTATTCA CTCATTTTGCTAGATGAAATTGAAAAAGCTCACCCTGATGTTATGCACATGTTCCTTCAAGTTTTAGACGATGGTCGTTT GACTGATGGGCAAGGCCGGACAGTTAGCTTTAAAGATACCATCATCATTATGACTTCTAATGCCGGGACAAGTACTAATG AAGCCTCTGTCGGATTTGGGGCAGCCCGCGAAGGACGAACAAGTTCAGTTCTGGGACAATTAACAAATTTCTTTAATCCA GAATTTATGAACCGTTTTGATGGTATTATTGAATTCCAAACATTAAGCAAAGATAATCTATTACATATTGTTGATTTGAT GTTAGAAGATGTCAACAATCGCCTCTCTCAAAATGGTCTTCACCTTGATGTGACCAATAAAGTTAAAGAGAAATTAGTCG ATCTTGGTTATAATCCAAAAATGGGTGCTCGTCCATTAAGAAGAACTATTCAAGATTACATTGAAGATGCTATTACTGAT TTCTACTTGGAAAATCCAAGTGAAAAAGAGCTTAAAGCAATGATGACTAGTAATGGAAATATCATTATTAAATCAGCAAA AAAATCTAATTCACCTGTGGAAGATCAAACCAAGTCTTACGAAAATTAA Protein sequence : MLCQNCQLNEASIHLYTNVNGKQKQIDLCQNCYQIMKTDANNSILGGIGSRSEKKQDPMNPFFDDFFGDLNNFRSFGNLP NTPPTQAGGNNGGNNGKIPNQQGSRNQNAQATQQPKGLLEEFGINVTEIARKGGIDPVIGRDEEITRVIEILNRRTKNNP VLIGEPGVGKTAVVEGLAQKIVDSDVPYKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRQDVILFIDEIHEI VGAGNAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQTKYEDYHHV KYTDDAIIAAATLSNRYIQDRFLPDKAIDLLDEAGSKLNLTLTFVDPKEIDQRLVEAENLKAQATRDEDYERAAYFRDQI IKYKELQKQKVDEEDTPIITEKTIEDILEDKTNIPVGDLKEKEQSQLIHLAEDLKSHVIGQDDAVDKIAKAIRRNRVGLG TPNRPIGSFLFVGPTGVGKTELSKQLAIELFGTADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYS LILLDEIEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTSTNEASVGFGAAREGRTSSVLGQLTNFFNP EFMNRFDGIIEFQTLSKDNLLHIVDLMLEDVNNRLSQNGLHLDVTNKVKEKLVDLGYNPKMGARPLRRTIQDYIEDAITD FYLENPSEKELKAMMTSNGNIIIKSAKKSNSPVEDQTKSYEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-147 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cipE | YP_004479236.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 0.0 | 56 |
| cipE | YP_004479236.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 5e-155 | 52 |
