Gene Information

Name : Psefu_0936 (Psefu_0936)
Accession : YP_004473008.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1014818 - 1015786 bp
Length : 969 bp
Strand : -
Note : PFAM: Domain of unknown function DUF523; Domain of unknown function DUF1722; KEGG: pmy:Pmen_1073 hypothetical protein

DNA sequence :
ATGTCCGTCAGCCCGCAGTACCGCAGAAAACCCACACTTGGCGTCAGCGCCTGCCTGCTGGGCGCCGAAGTCCGCTACAA
CGGTGGGCACAAGGCGTCGAGGTTGTGCCTGGAACAGCTCAGCGAGTACTTCGATTTCGTGCCCTACTGCCCTGAAGTGG
CCATCGGCCTGGGTACGCCGCGCGAGCCCATTCGTCTGGTCGGCGACCCGGCCGCGCCGCGCGTGGTAGGCACCGTGCAT
CCGGACCAGGATCATACCGATGCGCTGGCCGCCTACGGTGAACAGGTCGCCGCCGAACTGCCATCGATCAGCGGCTACAT
CGTCATGCAACAGTCGCCGTCCTGTGGCCTGGAACGGGTCAAGGTCTACCAGGACAACGGCCACCCGAGCGAGCCCAAGG
GCCGCGGCATCTTCACCCGCGTGCTCTGCGAGCGACACCCGAACCTGCCTATCGAGGAAGAAGGCCGCCTCAACGACCCG
GTGCTGCGCGAGAACTTCCTGACCCGCGTATTCACTTACTCGCAGTGGCAGACACTCTGCGAATCGGGCCTGACCCGCGG
CAAGCTGATCGAATTCCACGCCCGCCACAAGTACCTGCTGATGGCCACCGACCCGCTGCGCTACAAGCGCCTGGGCCGCA
TGCTCAGCGACCTCTCCGCGCAGGATCTGGACGAGCTGGCCGTCCGCTATATCGCCGAACTGATGACCGCCCTCAAGCGC
TGCGCCACCCGCGGCACCCACAGCAACGTGTTGCAGCATTTGAGCGGCTACCTCAAGGGCGCCCTCAGCGCCGAGGAAAA
GCAGGAAATGCAGCAGCTGATCACCCAGTACCGCAAGGGCATCATCCCGCTGGTGGTGCCGCTGACCCTGCTCAAGCACC
ATTTCCGTCAGCACCCGGATCGCTACATCGCCCAGCAGGTCTACCTGCAGCCGCACCCGGAAAACCTCAGCCTGCGAAAC
GCGATATGA

Protein sequence :
MSVSPQYRRKPTLGVSACLLGAEVRYNGGHKASRLCLEQLSEYFDFVPYCPEVAIGLGTPREPIRLVGDPAAPRVVGTVH
PDQDHTDALAAYGEQVAAELPSISGYIVMQQSPSCGLERVKVYQDNGHPSEPKGRGIFTRVLCERHPNLPIEEEGRLNDP
VLRENFLTRVFTYSQWQTLCESGLTRGKLIEFHARHKYLLMATDPLRYKRLGRMLSDLSAQDLDELAVRYIAELMTALKR
CATRGTHSNVLQHLSGYLKGALSAEEKQEMQQLITQYRKGIIPLVVPLTLLKHHFRQHPDRYIAQQVYLQPHPENLSLRN
AI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-63 41
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-63 41
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 8e-64 41
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-63 41
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_0936 YP_004473008.1 hypothetical protein VFG0490 Protein 6e-64 41