Gene Information

Name : Psefu_0847 (Psefu_0847)
Accession : YP_004472919.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 915427 - 915861 bp
Length : 435 bp
Strand : -
Note : TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: pmy:Pmen_0812 MerR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR

DNA sequence :
ATGAATATCGGTCAGGCTGCCAAGCACACCGGGCTCAGCGCCAAGATGATTCGCTACTACGAAGCCATCGGCCTGCTGCC
CAGCGCCGGGCGCAGCGAAAGCGGTTACCGCCAGTACGGCGAGGATGACCTGCAGCGCCTGCGTTTCATCCGTCGCGCCC
GTGACCTGGGCTTCTCGCTTGCCGAGTCCGGCCGGCTGCTGGCCCTGTGGCACGACCGCGAGCGCGCCAGCGCCGACGTA
AAGGCCCTGGCGGTGGAACATATCGAGGCGCTCAACGGCAAGATCGCCGAGCTCGAGGCACTGCGTGACACCCTGCAGAC
CCTGGTCGATCACTGCCAGGGTGACAATCGCCCCGACTGCCCGATCCTCGAAGACCTGCAGGCCGGCAGTGGCTGCTGTC
AGCCTGCAGCGGCGGCGCCCAGCGCCAGGCGCTGA

Protein sequence :
MNIGQAAKHTGLSAKMIRYYEAIGLLPSAGRSESGYRQYGEDDLQRLRFIRRARDLGFSLAESGRLLALWHDRERASADV
KALAVEHIEALNGKIAELEALRDTLQTLVDHCQGDNRPDCPILEDLQAGSGCCQPAAAAPSARR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 8e-20 41
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 5e-20 41
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 6e-20 41
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 4e-20 41
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 4e-20 41
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 5e-20 41
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 7e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_0847 YP_004472919.1 MerR family transcriptional regulator BAC0190 Protein 9e-40 59
Psefu_0847 YP_004472919.1 MerR family transcriptional regulator BAC0182 Protein 3e-35 54
Psefu_0847 YP_004472919.1 MerR family transcriptional regulator BAC0569 Protein 2e-32 51
Psefu_0847 YP_004472919.1 MerR family transcriptional regulator BAC0105 Protein 3e-30 47