Gene Information

Name : Psefu_0701 (Psefu_0701)
Accession : YP_004472773.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 763682 - 765175 bp
Length : 1494 bp
Strand : +
Note : PFAM: Aldehyde dehydrogenase domain; KEGG: pap:PSPA7_6087 aldehyde dehydrogenase

DNA sequence :
ATGACCCGTTTGACCCGTACCGACTGGGAGCAGCGTGCAAAGGATCTGAAAATCGAGACCCGCGCTTTCGTGCAGGGCCA
GTATCAGCCTGCTCAGAGCGGTGAAACCTTCGAATGCATCAGCCCGGTCGATGGCCGGGTGCTGGGCCAGGTCGCCAGTT
GTGACTTGGCGGACGCCGAACAGGCAGTTAAATCGGCGCGCGCCGCCTTCGATTCCGGCGTGTGGTCGCGCATCGCTCCG
GCCAAGCGCAAGGCCAAGATGATCCGCTTCGCTGAGCTGCTGATGGCCAACGCCGAAGAGCTCGCGCTGCTGGAAACCCT
GGACATGGGCAAGCCGATCAGCGATTCGCTGGGCATCGATATTCCGGCGGCGGCCAATGCCATTCGCTGGAGCGCTGAGG
CGATCGACAAGGTTTACGACGAAGTCGCGCCGACGCCCCATGACCAGCTCGGCCTGGTGACCCGCGAGCCGGTCGGCGTG
GTGGCTGCCATCGTGCCGTGGAACTTCCCGCTGCTGATGTCTAGCTGGAAGCTCGGCCCGGCCCTGGCCACTGGCAACTC
GGTGATCCTCAAGCCTTCCGAGAAATCGCCGCTGACCGCCATCCGCGTCGCCCAGTTGGCCATCGAAGCCGGTATCCCGG
CGGGCGTGTTCAACGTGCTGCCCGGTTACGGCCACACCGTCGGCAAGGCCCTGGCCCTGCATATGGATGTCGACACCATC
GTGTTCACCGGCTCGACCAAGATCGCCAAGCAGCTGATGATCTATGCCGGCGAATCGAACATGAAGCGCGTATGGCTGGA
GGCCGGTGGCAAGAGCCCCAACATCGTCTTCGCCGATGCGCCGGACCTCAAGGCCGCTGCCGAATCCGCTGCCAGCGCCA
TCGCCTTCAACCAGGGCGAAGTGTGCACCGCGGGCTCACGCCTGCTGGTGGAAAACTCCATCAAGGAGCGCTTCCTGCCG
ATGGTGGTCGAGGCCCTGCAAGGCTGGAAGGCCGGCAACCCGCTGGACCCGGACACCAACGTCGGCGCCCTGGTCGACAC
CCAGCAGATGAACACCGTGCTGCGCTACATCGAAGCCGGCCACAAGGACGGCGCCAAGCTGCTGGTCGGCGGCAAGCGCA
CCCTGGAGGAGAGCGGCGGCACCTACGTGGAGCCGACCATCTTCGACGGCGTGACCAATGCCATGACCATCGCCCGCGAG
GAAATCTTCGGCCCGGTGCTGTCGGTGATCGGCTTCGACAGCGCCGAGCAGGCGGTACAGATCGCCAACGACACTGTGTA
CGGCCTGGCCGCCGCAGTGTGGACCGCGGACATCTCCAAGGCGCACCTGACCGCCCGCGCTCTGCGCGCCGGCAGCGTGT
GGGTCAACCAGTACGATGGCGGCGACATGACCGCGCCGTTCGGTGGCTTCAAGCAGTCGGGCAACGGCCGGGACAAGTCG
CTGCATGCCTTCGACAAGTACACCGAACTGAAAGCCACCTGGATCAAACTCTGA

Protein sequence :
MTRLTRTDWEQRAKDLKIETRAFVQGQYQPAQSGETFECISPVDGRVLGQVASCDLADAEQAVKSARAAFDSGVWSRIAP
AKRKAKMIRFAELLMANAEELALLETLDMGKPISDSLGIDIPAAANAIRWSAEAIDKVYDEVAPTPHDQLGLVTREPVGV
VAAIVPWNFPLLMSSWKLGPALATGNSVILKPSEKSPLTAIRVAQLAIEAGIPAGVFNVLPGYGHTVGKALALHMDVDTI
VFTGSTKIAKQLMIYAGESNMKRVWLEAGGKSPNIVFADAPDLKAAAESAASAIAFNQGEVCTAGSRLLVENSIKERFLP
MVVEALQGWKAGNPLDPDTNVGALVDTQQMNTVLRYIEAGHKDGAKLLVGGKRTLEESGGTYVEPTIFDGVTNAMTIARE
EIFGPVLSVIGFDSAEQAVQIANDTVYGLAAAVWTADISKAHLTARALRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKS
LHAFDKYTELKATWIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-121 58
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-73 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-73 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-73 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-73 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-73 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_0701 YP_004472773.1 aldehyde dehydrogenase VFG0082 Protein 2e-73 41