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Name : Psefu_4093 (Psefu_4093) Accession : YP_004476142.1 Strain : Pseudomonas fulva 12-X Genome accession: NC_015556 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 4456530 - 4457924 bp Length : 1395 bp Strand : - Note : TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: pmy:Pmen_0649 replicative DNA helicase; SMART: ATPase, AAA+ type, core DNA sequence : ATGAACGACATCAGCATCACTGAACAGTACGACCTGCAAACCGCTGCCCTGAAAGTGCCGCCGCACTCGATCGAGGCCGA GCAGGCGGTGCTCGGTGGTTTGATGCTCGACAACAACGCCTGGGAGCGCGTGCTGGATCAGGTGTCCGATGGCGACTTCT ATCGCCATGACCATCGCCTGGTCTTCCGCGCCATCTTCAAGCTCGCCGAACGCAACCAGCCGTTCGACGTGGTCACCCTA TCCGAGCAATTGGACAAGGAAGGGCAACTGTCCCAGGTCGGCGGTCTCGCGTATCTCGGCGAGCTGGCCAAGAACACGCC ATCGGTGGCCAACATCAAGGCCTATGCCGGGATCATTCGCGAGCGCGCCACCCTGCGCAAACTGATCGGTATCAGCAACG AGATCGCCGATAGCGCTTATGCGCCCGAAGGCCGTACCGGCGAGGAAATCCTCGATGAGGCCGAGCGGCTGATCTTCCAG ATCGCCGAGGCGCGGCCCAAGACCGGTGGCCCGGTCGGTATCAACGACATTTTGGTCAAGGCCATCGACCGCATCGATGA GTTGTTCAACAACGGCGACGCAATCACCGGCCTGTCCACCGGCTTTACCGACCTGGACAACCTGACCAGTGGCCTGCAGC CGGCCGACATGATCATCGTCGCCGGTCGTCCGTCGATGGGTAAGACCACCTTCGCCATGAACCTGGTGGAAAACGCGCTG ATGCGCAGTGACAAGTCGATCCTGGTGTATTCCCTGGAGATGCCGTCCGAATCCATCGTGATTCGTATGCTGGCGTCCCT TGGTCGCATCGACCAGACCAAGGTGCGTGCTGGCCGCCTGGACGATGACGACTGGCCGCGGCTGACCTCGGCGGTCAACC TGCTCAACGACCGCAAGCTGTTCATCGATGACACCGCCGGTATCTCGCCGAGCGAGATGCGTGCGCGCACTCGACGCCTG GCTCGCGAGCACGGCGAGATCGGTCTGATCATGGTCGACTACCTGCAGCTGATGCAGATTCCTGGCTCCAGCGGCGACAG CCGGGTCAACGAGATTTCCGAAATCTCGCGCTCGCTCAAGGCGCTGGCCAAGGAATTCAACTGCCCGGTCATCGCCCTGT CGCAGCTCAACCGCGGCCTGGAGCAGCGCCCCAACAAGCGCCCGATCAACTCCGACTTGCGTGAATCCGGAGCGATCGAG CAGGACGCCGACATTATTCTGTTCGTCTACCGCGACGAGGTTTACCACCCGGAGACCGAGTACAAGGGCGTGGCCGAGAT CATCATCGGCAAGCAGCGTAACGGCCCGCTGGGCACCGCGCGCCTAGCCTTCCTCGGTAAATACTCGCGCTTCGAGAACC TGGCGCCTGGCAGCTACCAGTTCGAGGACGAGTGA Protein sequence : MNDISITEQYDLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLVFRAIFKLAERNQPFDVVTL SEQLDKEGQLSQVGGLAYLGELAKNTPSVANIKAYAGIIRERATLRKLIGISNEIADSAYAPEGRTGEEILDEAERLIFQ IAEARPKTGGPVGINDILVKAIDRIDELFNNGDAITGLSTGFTDLDNLTSGLQPADMIIVAGRPSMGKTTFAMNLVENAL MRSDKSILVYSLEMPSESIVIRMLASLGRIDQTKVRAGRLDDDDWPRLTSAVNLLNDRKLFIDDTAGISPSEMRARTRRL AREHGEIGLIMVDYLQLMQIPGSSGDSRVNEISEISRSLKALAKEFNCPVIALSQLNRGLEQRPNKRPINSDLRESGAIE QDADIILFVYRDEVYHPETEYKGVAEIIIGKQRNGPLGTARLAFLGKYSRFENLAPGSYQFEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 4e-119 | 56 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-107 | 55 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 9e-100 | 49 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-100 | 49 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 9e-100 | 49 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-96 | 48 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-91 | 44 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-91 | 44 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-79 | 43 |
