Gene Information

Name : Psefu_0399 (Psefu_0399)
Accession : YP_004472476.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : LytTR family two component transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 444783 - 445529 bp
Length : 747 bp
Strand : +
Note : KEGG: psp:PSPPH_0069 alginate biosynthesis regulatory protein AlgR; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain

DNA sequence : 
ATGAATGTCTTGATCGTTGATGACGAACCCCTTGCCCGTGAGCGCCTGAGCCGAATGGTGGCCGCGCTGGACGGCTATCG
TGTGGTCGAGCCCTCTGCGAGCAATGGCGAAGAGGCATTGGCCCTCGTGGAGAGCCTCAAGCCCGACGTAGTGCTGCTCG
ACATCCGCATGCCGGGCCTCGATGGTCTGCAGGCCGCTGCCAAGCTCTGCGAGCGCGAGGCGCCGCCAGCGGTGATCTTC
TGCACCGCCCATGATGAATTCGCGGTGGAGGCCTTTCAGGTCAGCGCCGTGGGCTATCTGGTCAAGCCCGTGCGCCCCGA
GCATCTCGAGGACGCGCTGAAAAAAGCCGAGCGCCTCAACCGTGTGCAACTGGCCGCGCTCACCCGCCCGGCGGCGGAAA
GCGGCGTCGGCCCACGCAGCCACATCAGCGCGCGGACCCGCAAGGGCATCGAGCTGATCCCGCTGGACGACGTGATCTAT
TTCATCGCCGACCACAAGTACGTGACCCTGCGCCACGACGGTGGCGAGGTGTTGCTAGATGAGCCGCTCAAGGCCCTCGA
AGACGAATTCGGCGACCGTTTCGTGCGTATCCACCGCAACGCTCTGGTGGCGCGCGAGCGCATCGAGCGGCTGCAGCGAA
CCCCGCTGGGCCACTTCCAGCTGTATCTGAAGGGGCTCAATGGCGATGCGCTGGTGGTCAGTCGTCGTCACGTCGCGGGC
GTGCGCAAGCTGATGAGCCAGATCTAG

Protein sequence : 
MNVLIVDDEPLARERLSRMVAALDGYRVVEPSASNGEEALALVESLKPDVVLLDIRMPGLDGLQAAAKLCEREAPPAVIF
CTAHDEFAVEAFQVSAVGYLVKPVRPEHLEDALKKAERLNRVQLAALTRPAAESGVGPRSHISARTRKGIELIPLDDVIY
FIADHKYVTLRHDGGEVLLDEPLKALEDEFGDRFVRIHRNALVARERIERLQRTPLGHFQLYLKGLNGDALVVSRRHVAG
VRKLMSQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 1e-52 47
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 1e-52 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_0399 YP_004472476.1 LytTR family two component transcriptional regulator VFG0119 Protein 6e-105 87