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Name : Psefu_3670 (Psefu_3670) Accession : YP_004475725.1 Strain : Pseudomonas fulva 12-X Genome accession: NC_015556 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 3942264 - 3943304 bp Length : 1041 bp Strand : + Note : SMART: Cystathionine beta-synthase, core; TIGRFAM: KpsF/GutQ; KEGG: pmy:Pmen_0875 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core DNA sequence : ATGATGAGTCGCCAGGGCTTTCCCGCTATAATCCCCGTCTTTTTCGTCGAGCAGTCCAAGCCGAGCATGAACCAGACCCG CGACCTGATTGATTCCGCACAGCGCACCATTCGCCTCGAGATAGAGGCAGTTCAGGAGCTGCTGCCTCGTATCGACGCCA ATTTCGTCAAGGCCTGCGAGCTGATTCTGGCCAGCAAGGGCCGCGTGGTCGTGGTGGGCATGGGCAAGTCCGGGCATATC GGCAACAAGATCGCCGCGACGCTGGCGAGCACCGGCACCACCGCCTTTTTCGTGCACCCGGCCGAGGCCAGCCACGGCGA CATGGGCATGATCACCCGCGATGACGTGGTGCTGGCTCTGTCCAACTCGGGTTCCACCGCGGAAATTGTCACCCTGTTGC CATTGATCAAGCGCCTCGGCATCACCCTGATCAGCATGACCGGCAACCCCGAGTCGCCGCTGTCCAAGGCCGCCGAAGTC AACCTCGACACCCGCGTCGCCAAGGAAGCCTGCCCGCTCAACCTGGCGCCAACTTCCTCGACCACTGCCGCCCTGGTACT GGGCGACGCCCTGGCCATCGCCCTGCTCGAAGCCCGCGGTTTCACCGCCGAAGACTTCGCCTTCTCGCACCCGGGTGGCG CCCTGGGCCGCCGCCTGTTGCTCAAGGTGGAGAACGTCATGCATGCCGGCGACAGCCTGCCTCAGGTCAAGCGCGGCACC AGCCTGCGCGAAGCCCTGCTGGAGATGACCCAGAAAGGTTTGGGCATGACCGCCGTTCTGGAAAACGACGGCCGCCTGGC CGGCATCTTCACCGACGGCGACCTGCGCCGAGCGCTGGACAAAGGCATCGACGTGCGTGACGCACGCATCGACGAAGTCA TGACCCCCCACGGCAAGACCGCAAGGGCTGACATGCTGGCCGCCGAAGCCCTGAAGATCATGGAAGACAACAAGATCAGC GCGCTGGTGGTGATCGACGCAGAGGGCTTTCCGATTGGCGCCTTCAACCTGGGCGATCTGCTGCGCGCGGGGGTCATGTG A Protein sequence : MMSRQGFPAIIPVFFVEQSKPSMNQTRDLIDSAQRTIRLEIEAVQELLPRIDANFVKACELILASKGRVVVVGMGKSGHI GNKIAATLASTGTTAFFVHPAEASHGDMGMITRDDVVLALSNSGSTAEIVTLLPLIKRLGITLISMTGNPESPLSKAAEV NLDTRVAKEACPLNLAPTSSTTAALVLGDALAIALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHAGDSLPQVKRGT SLREALLEMTQKGLGMTAVLENDGRLAGIFTDGDLRRALDKGIDVRDARIDEVMTPHGKTARADMLAAEALKIMEDNKIS ALVVIDAEGFPIGAFNLGDLLRAGVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-53 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 8e-54 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-53 | 44 |
