Gene Information

Name : Psefu_3147 (Psefu_3147)
Accession : YP_004475204.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Unknown
Product : Recombination-associated protein rdgC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 3368596 - 3369516 bp
Length : 921 bp
Strand : +
Note : KEGG: psb:Psyr_1588 recombination associated protein; HAMAP: exonuclease, RdgC; PFAM: exonuclease, RdgC

DNA sequence :
ATGTGGTTTCGCAACCTGCTGGTCTACCGCCTCACCCAGGACGTCGACTTCGATACCGAAAAACTGGAGGCCGCACTGGC
CGCCAAGCCGGCGCGCCCCTGCGCCAGCCAGGAACTGGCGACCTATGGCTTCGTCGCCCCTTTCGGCAAGGGCGAGGATG
CACCGCTGGTGCATGAAAGCCAGGGCTTCCTGCTGATTTCCGCTCGCAAGGAAGAGCGCATTCTGCCCGGCAGCGTGGTC
AAGGACGCCGTGAAGGAGAAGGTCGACGAGATCGAAAGCGAGCAGATGCGCAAGGTCTACAAGAAGGAGCGCGAGCAGAT
CAAGGACGAGATCGTCCAGGCGTTCCTGCCGCGCGCCTTCATTCGCAAGTCCGCGACCTTCGCCGCCATCGCCCCGGCCC
AGGGCCTGATTATCGTCAACGCTTCGAGCCCCAAGCGCGCCGAAGACCTGCTGTCGACCCTGCGCGAAGCCATCGGCTCG
CTGCCGGTGCGCCCGCTGACCGTGAAGATCGCCCCGAGCGCGACCATGACCGACTGGGTCAAGGCCCAGCAGGCCGCTGC
CGACTTCCACGTGCTGGACGAGTGCGAGCTGCGCGACACCCACGAAGACGGCGGCATCGTGCGCTGCAAGCGCCAGGACC
TGACCGGCGAAGAAGTGCAGCTGCACATGAGCTCCGGCAAGCAGGTGACCCAACTGTCCCTGGCCTGGCAGGACAAGCTG
TCCTTCGTGCTCGATGACAAGCTGGTGGTCAAGCGCCTGAAGTTCGAAGACCTGCTGCAGGAGCAGGCCGAGCAGGATGG
CGGCGACGACGACCTGAGCCAGCAGGACGCCAGCTTCACGCTGATGATGCTGACCCTGATCGAGTTCCTGCCGGCGTTGT
TCGAAGCCCTGGGTGGCGAAGACACTCCGCAAGGTCTCTAA

Protein sequence :
MWFRNLLVYRLTQDVDFDTEKLEAALAAKPARPCASQELATYGFVAPFGKGEDAPLVHESQGFLLISARKEERILPGSVV
KDAVKEKVDEIESEQMRKVYKKEREQIKDEIVQAFLPRAFIRKSATFAAIAPAQGLIIVNASSPKRAEDLLSTLREAIGS
LPVRPLTVKIAPSATMTDWVKAQQAAADFHVLDECELRDTHEDGGIVRCKRQDLTGEEVQLHMSSGKQVTQLSLAWQDKL
SFVLDDKLVVKRLKFEDLLQEQAEQDGGDDDLSQQDASFTLMMLTLIEFLPALFEALGGEDTPQGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 8e-43 41