Gene Information

Name : Psefu_3045 (Psefu_3045)
Accession : YP_004475103.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 3256472 - 3257224 bp
Length : 753 bp
Strand : +
Note : KEGG: pmy:Pmen_4422 flagellar biosynthesis protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein

DNA sequence : 
ATGACCGCATCCCGTGTCGCCCGCCTTGGCGGGCTGGCCCTGGCGCTGCTGCCTCTGAGCGTGCAGGCGGCCAACGGTGA
CATCACGCTCTTGAGCCTGAACGACACCGAGAACGGCCAGGACCTGAGCGTCAAGGTACAGATCCTGGTGCTGATGACGC
TGCTCGGCCTGCTGCCGGCCATGCTGCTGATGATGACCTGCTTCACCCGCTTCATCATCGTGCTGGCCATCCTGCGTCAG
GCCATCGGCCTGCAGCAGAGCCCGCCGAACAACGTGCTGATCGGCATCGCCCTGTGCCTGACCCTGCTGGTGATGCGCCC
GGCCTGGCAGGAGCTGTACGAGAATGCCTACCAGCCCTTCGAGACCGACCAACTGACGCTGCCCGAGGCGCTGGACAGCG
CCAAGGGCGTGATGGCGCGCTTCATGCTCGCGCAGACCAACAAGAACTCGCTGGTCACCATGGTCGAGCTGGCTGGCGAG
ACCATGCCCGAAGATCCGACCACCCTGGATTTCTCGCTGATCCTCCCGGCGTTCGTGCTCAGCGAGCTGAAAACCGCGTT
CCAGCTGGGGTTCATGATCTTCATCCCGTTTCTGGTCATCGACCTGGTGGTGGCCAGCGTGCTGATGGCCATGGGCATGA
TGATGCTCTCGCCGATGATGATCTCGCTGCCCTTCAAGCTCATGGTGTTCGTGCTGGTGGACGGCTGGACACTGATGATG
GGCACCCTCGCCACCAGTGTTCAACCCTTCTAG

Protein sequence : 
MTASRVARLGGLALALLPLSVQAANGDITLLSLNDTENGQDLSVKVQILVLMTLLGLLPAMLLMMTCFTRFIIVLAILRQ
AIGLQQSPPNNVLIGIALCLTLLVMRPAWQELYENAYQPFETDQLTLPEALDSAKGVMARFMLAQTNKNSLVTMVELAGE
TMPEDPTTLDFSLILPAFVLSELKTAFQLGFMIFIPFLVIDLVVASVLMAMGMMMLSPMMISLPFKLMVFVLVDGWTLMM
GTLATSVQPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 3e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_3045 YP_004475103.1 flagellar biosynthetic protein FliP VFG1259 Protein 4e-34 55
Psefu_3045 YP_004475103.1 flagellar biosynthetic protein FliP VFG2016 Protein 1e-32 54
Psefu_3045 YP_004475103.1 flagellar biosynthetic protein FliP VFG2338 Protein 1e-32 54
Psefu_3045 YP_004475103.1 flagellar biosynthetic protein FliP VFG2494 Protein 5e-34 54
Psefu_3045 YP_004475103.1 flagellar biosynthetic protein FliP VFG2455 Protein 4e-16 41