Gene Information

Name : Psefu_0294 (Psefu_0294)
Accession : YP_004472372.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 333047 - 333769 bp
Length : 723 bp
Strand : +
Note : PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: ribonuclease phosphorolytic, bacterial-type; HAMAP: ribonuclease phosphorolytic, bacterial-type; KEGG: pfl:PFL_6059 ribonuclease PH

DNA sequence :
ATGAAACGTCCCAGTGGCCGCGCCGCCGATCAGTTGCGCCCGATCCGCATCACCCGCAACTACACCAAGCACGCTGAAGG
TTCGGTGTTGGTCGAGTTCGGCGACACCAAGGTGATCTGCACCGTTAGCGTCGAGCAGGGCGTACCGCGTTTTCTGAAAG
GCCAGGGCCAGGGTTGGGTGACCGCTGAATATGGCATGCTGCCGCGCGCCACCGGCGACCGTAACCAGCGTGAGGCCAGC
AAGGGCAAGCAGGGCGGTCGTACCCTGGAAATCCAGCGCCTGATCGGCCGCTCGCTGCGCGCCGCGCTGGACATGAGCAA
GCTGGGCGAGAACACCCTGTACGTCGACTGCGACGTGATCCAGGCCGACGGCGGCACCCGCACCGCGTCGATCACCGGCG
CCATGGTCGCCCTGGTCGATGCCCTGAAAGTGATGAAGAAGCGCGGTGGCCTGAAAGGCGGCGACCCGCTCAAGCAGATG
ATCGCTGCCGTTTCGGTCGGCATCTATCAGGGCGAGCCGGTACTGGACCTGGATTACCTGGAAGACTCCGCCGCCGAGAC
CGACCTGAACGTGGTGATGACCAGCACCGGTGGTTTCATCGAGGTGCAGGGCACCGCCGAAGGCGCGCCGTTCCAGCCGG
CCGAGCTGAATGCCATGCTGGCCCTGGCGCAGCAGGGCATGGGCGAGCTGTTCGCCCTGCAACAGGCTGCACTGGCCGAA
TGA

Protein sequence :
MKRPSGRAADQLRPIRITRNYTKHAEGSVLVEFGDTKVICTVSVEQGVPRFLKGQGQGWVTAEYGMLPRATGDRNQREAS
KGKQGGRTLEIQRLIGRSLRAALDMSKLGENTLYVDCDVIQADGGTRTASITGAMVALVDALKVMKKRGGLKGGDPLKQM
IAAVSVGIYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPAELNAMLALAQQGMGELFALQQAALAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-62 60