Gene Information

Name : Psefu_2892 (Psefu_2892)
Accession : YP_004474950.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 3107774 - 3108475 bp
Length : 702 bp
Strand : -
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: Lipoprotein releasing system, ATP-binding protein; KEGG: pmy:Pmen_1608 lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter-like

DNA sequence : 
ATGAGTGATCCGGTCGTGCAGGCGCAGGGCGCCGTGCTCAGCTGCCGCAACCTGAGCAAGCGCTACGAAGAAGGCCCGCA
ATCGGTGGTGGTGCTCGACGATCTGCAACTGGAGCTGTTCGCCGGCGAGCGCGTGGCCATCGTCGGCAGCTCGGGCTCGG
GCAAGAGCACGCTGCTCAACATGCTCGGCGGCCTGGATACGCCGAGCAGCGGCAGCGTGTGGCTGGCCGGCGAGGAGCTG
TCGGCGCTCAACGAGAAACAGCGCGGCCTGCTGCGCAACCGCGCTCTGGGCTTCGTCTACCAGTTCCATCACCTGCTGGC
CGAGTTCACTGCCCTGGAAAACGTCTGCATGCCCCTGCTGATCGGCAAAACGCCGATTCCCGAAGCGCGTCAGCGTGCCA
CCGAGCTGCTCGAGCGCGTCGGCCTTGGTCATCGCCTGAGCCACAAACCGGCCGAGCTGTCCGGCGGCGAGCGTCAGCGC
GTGGCCATCGCCCGGGCGCTGGTCAACCGCCCGGGCCTGGTGCTGCTCGACGAGCCCACCGGCAACCTGGATTCGCACAC
CGCCCAGGGCATTCAGGAACTGATGCGCGAGCTGAGCAGCCAGTCGCAGACCGCTTTCCTGATCGTGACCCACGACCTGC
AGCTGGCGCGGCAGATGGACCGGGTGCTGAGCCTGGAAGACGGCAAGCTGGTGAACGCCTGA

Protein sequence : 
MSDPVVQAQGAVLSCRNLSKRYEEGPQSVVVLDDLQLELFAGERVAIVGSSGSGKSTLLNMLGGLDTPSSGSVWLAGEEL
SALNEKQRGLLRNRALGFVYQFHHLLAEFTALENVCMPLLIGKTPIPEARQRATELLERVGLGHRLSHKPAELSGGERQR
VAIARALVNRPGLVLLDEPTGNLDSHTAQGIQELMRELSSQSQTAFLIVTHDLQLARQMDRVLSLEDGKLVNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_2892 YP_004474950.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 7e-39 46
Psefu_2892 YP_004474950.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 1e-32 44
Psefu_2892 YP_004474950.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7685735. Protein 1e-35 41