Gene Information

Name : Psefu_0283 (Psefu_0283)
Accession : YP_004472361.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 321701 - 323776 bp
Length : 2076 bp
Strand : -
Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; nucleic acid binding, OB-fold, tRNA/helicase-type; Helicase, C-terminal; KEGG: psa:PST_0135 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-t

DNA sequence :
ATGAGCGAGCTGTCGACGGTTTCCGTTACCGACCTCAAAGGCGTCGGCGCGGCCCTGGCGGAAAAGCTCGCCAAGGTCGG
CCTGGAAACCCTGCAGGACATCCTGTTCCACCTGCCGCTGCGCTACCAGGACCGTACCCGTATCGTGCCCATCGGCGCCC
TGCGCCCCGGCCAGGATGCGGTGGTCGAAGGCACCGTTGCCGGCGCCGATGTGGTGATGGGCCGGCGCCGCAGCCTGCTG
GTGCGCCTGAGTGACGGCAGCGGCACCCTGAGCCTGCGCTTTTACCACTTCAGCAATGCACAGAAGGAAGGCCTCAAGCG
CGGCACCCAGGTGCGCTGCTATGGGGAAATCCGCCCTGGCTCGTCCGGCCTGGAAATCTATCACCCCGAATATCGCGCGC
TGACCGGTGACGAGCCGCCAGCCGTCGAACAGACCCTGACGCCGATCTATCCGACCACCGAAGGCCTGACCCAGCAACGC
CTGCGCCAGCTCAGCGAGCAGGCCCTGGCACGCCTCGGCCCGCACAGCCTGCCGGACTGGCTGCCCCGGGAACTGGCCAA
GGAGTACGAACTGGCGCCGCTGGACCAGGCGATTCGCTACCTGCATCGCCCGCCACCGGACGCCGACCTCGAGGAGCTCG
CCGAAGGCCGCCACTGGGCCCAGCACCGGCTGGCCTTCGAAGAGCTGCTCACCCATCAGCTGTCGATGCAGCGCCTGCGC
GAAAGCGCCCGAGCTCAGCAGGCGCCGTGCCTGCCAGTGGCCAAGCGCCTGCCCCAGCAGTTTCTCGACAACCTCGGCTT
CAAGCCCACCGGCGCACAGCAACGGGTTGGCGCGGAAATCGCCTACGACCTCAGCCAGCACGAGCCGATGCTGCGCCTGG
TGCAGGGCGACGTCGGCGCCGGCAAGACGGTGGTCGCAGCTTTCGCAGCGCTGCAGGCCATCGAGGCCGGTTATCAGGTG
GCGCTGATGGCGCCGACGGAAATTCTTGCCGAGCAGCACTTCATAAACTTCACCCGCTGGCTGCAGCCCCTTGGCCTGGA
AACCGCCTGGCTGGCCGGCAAGCTCAAGGGCAAGGCGCGGGCCACTGCCCTAGAGCAGATTGCCGCCGGCGTGCCCATGG
TGGTCGGCACCCACGCGCTGTTCCAAGACGAAGTGCGCTTTCGCAACCTGGCCCTGGCGATCATCGACGAACAGCACCGC
TTCGGCGTGCAGCAGCGCCTGGCCCTGCGCCAGAAGGGGGTGGGCGGTCGGCTCAGCCCACATCAGCTGATCATGACCGC
CACGCCGATCCCGCGCACCCTGGCGATGAGCGCCTACGCCGACCTGGATACCTCGATCCTCGACGAACTGCCGCCCGGCC
GCACGCCCGTGAACACCGTACTGGTCGCCGACAGCCGCCGCTTCGAGGTGGTCGAGCGGGTTCGCTCGGCTTGCAACGAA
GGCCGCCAGGCATATTGGGTATGCACGCTGATCGAGGAATCCGAGGAGCTGACCTGCCAGGCCGCGCAGACCACCTACGA
GGATCTGGCCGCCGCGCTGGTCGGCCAGCAGGTCGGGCTGATCCACGGCCGCATGAAGCCGGCCGAGAAAGCCGCGGTGA
TGGATCAGTTCAAGCAGGGCAACCTGCAACTGCTGGTGGCCACCACGGTGATCGAGGTGGGTGTCGACGTACCCAACGCC
AGCCTGATGATCATCGAGAACCCCGAACGCCTCGGCCTGGCCCAGCTGCACCAGCTGCGCGGGCGGGTCGGCCGGGGTAG
CGCGGCCAGCCACTGCGTACTGCTCTACCACCCGCCACTGTCGCAGATCGGCCGTGAACGGTTGGGCATCATGCGTGAAA
CCTGTGACGGCTTCGTCATTGCGGAGAAGGATCTGGAGTTGCGCGGCCCCGGTGAAATGCTCGGCACTCGACAAACCGGC
CTGCTGCAGTTCAAGGTAGCTGATCTGATGCGTGACGCCGACCTGCTGCCGGCGGTGCGCGACGCCGCCCAGGCCCTGCA
GGAACAATGGCCGCAACACGTCAGCCCACTGCTCGAACGCTGGCTGCGCCACGGACAACAATATGGGCAAGTGTGA

Protein sequence :
MSELSTVSVTDLKGVGAALAEKLAKVGLETLQDILFHLPLRYQDRTRIVPIGALRPGQDAVVEGTVAGADVVMGRRRSLL
VRLSDGSGTLSLRFYHFSNAQKEGLKRGTQVRCYGEIRPGSSGLEIYHPEYRALTGDEPPAVEQTLTPIYPTTEGLTQQR
LRQLSEQALARLGPHSLPDWLPRELAKEYELAPLDQAIRYLHRPPPDADLEELAEGRHWAQHRLAFEELLTHQLSMQRLR
ESARAQQAPCLPVAKRLPQQFLDNLGFKPTGAQQRVGAEIAYDLSQHEPMLRLVQGDVGAGKTVVAAFAALQAIEAGYQV
ALMAPTEILAEQHFINFTRWLQPLGLETAWLAGKLKGKARATALEQIAAGVPMVVGTHALFQDEVRFRNLALAIIDEQHR
FGVQQRLALRQKGVGGRLSPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRFEVVERVRSACNE
GRQAYWVCTLIEESEELTCQAAQTTYEDLAAALVGQQVGLIHGRMKPAEKAAVMDQFKQGNLQLLVATTVIEVGVDVPNA
SLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHPPLSQIGRERLGIMRETCDGFVIAEKDLELRGPGEMLGTRQTG
LLQFKVADLMRDADLLPAVRDAAQALQEQWPQHVSPLLERWLRHGQQYGQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-108 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_0283 YP_004472361.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 88