Gene Information

Name : Psefu_0252 (Psefu_0252)
Accession : YP_004472330.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 285223 - 285741 bp
Length : 519 bp
Strand : -
Note : KEGG: pap:PSPA7_0155 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301

DNA sequence :
ATGAGTAACACCACCAGCAGCCAGAAATTCATCGCGCGCAACCGCGCCCCGCGGGTGCAGATCGAGTACGACGTTGAGCT
GTACGGCGCCGAGAAAAAGGTGCAGTTGCCCTTCGTCATGGGCGTGATGGCAGACCTCGCCGGCAAGCCGGAAGAGCCGT
TGGCCGCCGTCGCCGACCGCAAGTTCCTGGAAATCGACGCCGACAACTTCGACTCACGCCTCAAGGCCATGAAGCCGCGC
GCGGCTTTCCACGTGCCCAACGCCCTGACTGGTGAAGGCAACCTGAGCCTGGACATCACCTTCGAGAGCATGGACGACTT
CAGCCCGGCGGCCATCGCCCGTAAGGTCGACTCGCTCAACCAGCTGCTCGAAGCGCGCACCCAGCTCGCCAACCTGCTGA
CCTACATGGACGGCAAGACCGGTGCCGAAGAGCTGATCATCAAGGCGATCAAGGACCCGGCCCTGCTGCAGGCCCTGGCC
AGTGCGCCCAAGCCCCAAGACAACGAGCCGCAAGCCTAA

Protein sequence :
MSNTTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPEEPLAAVADRKFLEIDADNFDSRLKAMKPR
AAFHVPNALTGEGNLSLDITFESMDDFSPAAIARKVDSLNQLLEARTQLANLLTYMDGKTGAEELIIKAIKDPALLQALA
SAPKPQDNEPQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-58 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_0252 YP_004472330.1 type VI secretion protein VFG2069 Protein 8e-72 92