Gene Information

Name : Psefu_0251 (Psefu_0251)
Accession : YP_004472329.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : type VI secretion protein EvpB
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 283717 - 285210 bp
Length : 1494 bp
Strand : -
Note : KEGG: pag:PLES_00851 hypothetical protein; TIGRFAM: protein of unknown function DUF877; PFAM: protein of unknown function DUF877

DNA sequence :
ATGAGCCAACAGACCCAGGCGTCCGAACAGTCGCTCGCCACCTCCGAACAGACCAGCGAATTCGCCTCGCTGCTGCTGCA
GGAATTCAAACCCAAGACCGAGCGCGCCCGTGAAGCGGTGGAAACCGCCGTGCGCACCCTGGCCGAGCATGCCCTGAGCA
AGACCGACCTGATCTCCGACGACGCCATCAAGTCGGTGGAATCGATCATCGCCGCGATCGACGCCAAGCTCACCGCCCAG
GTCAACCTGATCATGCACCACCCGGATTTCCAGCAGCTGGAAAGCGCCTGGCGTGGCCTGCACTACCTGGTCAACAACAC
CGAGACCGACGAGCAGCTGAAGATCCGCGTGCTCAACATCTCCAAGACCGAGCTGCACAAGACCCTGAAGAAATTCAAGG
GCACCGCCTGGGACCAGAGCCCGATCTTCAAGAAGCTCTACGAAGAGGAATACGGTCAGTTCGGTGGCGAGCCCTACGGC
TGCCTGGTGGGCGACTACTACTTCGACCAGTCGCCGCCCGATGTCGAACTGCTCGGCGAGATCGCCAAGATCTCCGCGGC
CATGCACTCGCCGTTCATTTCCGCGGCCTCGCCGACGGTCATGGGCATGGGTTCCTGGCAGGAGCTGTCCAACCCGCGCG
ACCTGACCAAGATCTTCACCACGCCCGAATACGCCGGCTGGCGCTCGCTGCGTGACTCCGAGGATTCGCGCTACATCGGT
CTGACCATGCCGCGCTTCCTGGCGCGTCAGCCCTACGGCGCGAAGACCGACCCGGTTGAAGAGTTCGCCTTCGAGGAAGA
AACCGACGGCGCCGACAGCAGCAAGTACACCTGGGCCAACTCGGCGTACGCCATGGCGGTCAACATCAACCGTTCGTTCA
AGCTCTACGGCTGGTGCTCGCGCATCCGCGGCGTGGAGTCGGGCGGTGAAGTGCCGAACCTGCCGGCGCACACCTTCCCC
ACCGACGACGGTGGCGTGGACATGAAGTGCCCGACCGAGATCGCCATCTCCGACCGCCGCGAGGCCGAGCTGGCGAAGAA
CGGTTTCATGCCGCTGCTGCACAAGAAGAACACCGACCTGGCCGCCTTCATCGGCGCCCAGTCGCTGCACAAGCCGGCCG
AGTACGACGATCCGGACGCCACCGCCAACGCCAACTTGGCCGCGCGCCTGCCGTACCTGTTCGCCACCTGCCGCTTCGCC
CACTACCTGAAGTGCATCGTGCGCGACAAGATCGGCTCGTTCAAAGAGCGCGACGAGATGCAGCGCTGGTTGCAGGACTG
GATCCTCAACTACGTCGACGGTGACCCGGCGCACTCCACCGAAACCACCAAGGCCCAGCACCCACTGGCCGAAGCCGAAG
TGGTGGTCGAGGAGATCGAGGGCAACCCGGGCTACTACAGCTCCAAGTTCTATCTGCGCCCGCACTATCAGCTCGAAGGG
CTGACCGTGTCGCTGCGCCTGGTATCCAAACTGCCTTCGGCCAAGGGGGCCTGA

Protein sequence :
MSQQTQASEQSLATSEQTSEFASLLLQEFKPKTERAREAVETAVRTLAEHALSKTDLISDDAIKSVESIIAAIDAKLTAQ
VNLIMHHPDFQQLESAWRGLHYLVNNTETDEQLKIRVLNISKTELHKTLKKFKGTAWDQSPIFKKLYEEEYGQFGGEPYG
CLVGDYYFDQSPPDVELLGEIAKISAAMHSPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRDSEDSRYIG
LTMPRFLARQPYGAKTDPVEEFAFEEETDGADSSKYTWANSAYAMAVNINRSFKLYGWCSRIRGVESGGEVPNLPAHTFP
TDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDLAAFIGAQSLHKPAEYDDPDATANANLAARLPYLFATCRFA
HYLKCIVRDKIGSFKERDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAEAEVVVEEIEGNPGYYSSKFYLRPHYQLEG
LTVSLRLVSKLPSAKGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-84 41
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 8e-85 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_0251 YP_004472329.1 type VI secretion protein EvpB VFG2070 Protein 0.0 94
Psefu_0251 YP_004472329.1 type VI secretion protein EvpB VFG2093 Protein 1e-85 41