Gene Information

Name : Psefu_2517 (Psefu_2517)
Accession : YP_004474576.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2711722 - 2712222 bp
Length : 501 bp
Strand : -
Note : KEGG: pfl:PFL_2858 thiol peroxidase; HAMAP: thiol peroxidase Tpx; PFAM: Redoxin

DNA sequence : 
ATGGCTCAAGTAACCCTGCGCGGTAACCCGGTTGAAGTCGCTGGCCAGTTACCGCAAGTCGGTCAGCAAGCGCCGGCATT
CACCCTGGTTGGCGCTGGCCTGGCGGACGTCAGCCTGAGCAGCCTGGCGGGCAAGCGCAAAGTGCTGAACATTTTCCCAA
GCGTCGACACCCCGACCTGCGCCACCTCGGTACGCAAGTTCAACGCCGAAGCCAGCAAGCTGAGCAATACCGCCGTGCTG
TGCATCTCCGCTGACCTGCCGTTCGCCCAGGCGCGCTTCTGCGGTGCCGAAGGCCTGGAAAACGTCCAGAATCTGTCGAC
CATGCGCGGCGCCGAGTTCCTCAAGGACTACGGCGTAGCCCTGAGCTCCGGCCCGCTGGCTGGCGTCGCCGCCCGCGCCG
TGGTGGTGCTGGATGAGAGCGACAAGGTGTTGCACAGCGAGCTGGTTGGCGAAATCGCTGACGAGCCGAACTACGAAGCA
GCCCTGGCTGTGCTCAAGTAA

Protein sequence : 
MAQVTLRGNPVEVAGQLPQVGQQAPAFTLVGAGLADVSLSSLAGKRKVLNIFPSVDTPTCATSVRKFNAEASKLSNTAVL
CISADLPFAQARFCGAEGLENVQNLSTMRGAEFLKDYGVALSSGPLAGVAARAVVVLDESDKVLHSELVGEIADEPNYEA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 6e-30 47
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 6e-30 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 4e-30 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 4e-30 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_2517 YP_004474576.1 thiol peroxidase VFG0087 Protein 2e-30 47