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Name : Psefu_0245 (Psefu_0245) Accession : YP_004472323.1 Strain : Pseudomonas fulva 12-X Genome accession: NC_015556 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 276124 - 278826 bp Length : 2703 bp Strand : - Note : TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: pmy:Pmen_2331 ATPase; SMART: ATPase, AAA+ type, core DNA sequence : ATGAGTGAAATCAGTCGCGCCGCGTTGTTCGGCAAGCTCAACAGCGTCGCTTACAAGGCCATCGAAGCCGCCACCGTGTT CTGCAAGCTGCGTGGCAACCCCTATGTCGAACTGAGCCACTGGCTGCACCAGATCCTGCAGCTGCAGGATTCCGACCTGC ACCAGATCATCCGCCAGTTCAGCATCGAGCCGGCACGCCTGGCCAAGGACATCACCGAGGCCCTGGACCGCCTGCCGCGC GGCTCCACCTCGATCACCGACCTGTCCTCCCATGTCGAGGAAGCGGTCGAGCGCGGCTGGGTCTACGGCAGCCTGATGTT CGGCGAAAGCCAGGTGCGCACCGGCTACCTGATCGTCGGCATCCTCAAGACGCCAAGCCTGCGCAACGCGCTGCTGGCCA TCTCCCGGGAGTTCGACAAGCTCAGGGTCGAGACCCTCACCGAGCGCTTCGATGAAGTGGTCGGCGCCTCGCCGGAAAAC GCCCTGACCGCCACCGACGGCTTCCAGGCCGGCGCTGCGCCGGGCGAGGCCAGCGGCGCCATCGCGCCGAGCGCCATGGG CAAGCAGGAAGCGCTCAAGCGCTTCACCGTCGACCTCACCGAACAGGCGCGCAGCGGCAAGCTCGACCCCATCGTCGGCC GTGACGACGAGATTCGCCAACTGGTCGATATCCTCATGCGCCGCCGCCAGAACAACCCGATCCTCACCGGCGAAGCCGGC GTGGGCAAGACGGCGGTGGTCGAAGGCTTCGCCCTGCGCATCGTCGCCGGCGACGTACCGCCGAGCCTCAAGGACGTCGA GCTGCGCAGCCTGGACGTCGGCCTGCTGCAGGCCGGCGCCAGCATGAAGGGTGAATTCGAGCAGCGCCTGCGCCAGGTCA TCGAGGACGTGCAGAGCTCGCCCAAGCCGATCATCCTGTTCATCGACGAAGCCCACACCCTGGTCGGCGCTGGTGGCGCG GCCGGCGCCGGCGACGCCGCCAACCTGCTCAAGCCAGCCCTGGCCCGCGGCACCCTGCGCACCGTGGCGGCCACCACCTG GGCCGAGTACAAGAAACACATCGAGAAGGACCCGGCCCTGACCCGTCGCTTCCAGGTGGTACAGGTCGACGAGCCTTCCG AGCATCGCGCCATCCTGATGATGCGCGGCGTCGCCTCGACCATGGAAAAGCACCATCAGGTGCAGATTCTCGACGAAGCC CTGGAAGCTTCGGTCAAGCTGTCGCACCGCTACATCCCGGCGCGCCAGTTGCCGGACAAGTCGGTCAGCCTGCTCGATAC CGCCTGCGCCCGCGTTGCCATCAGCCTGCACGCGGTGCCCGCCGAGGTGGACGACAGTCGTCGACGCATCGAAGCCCTGG AAACCGAGCTGGCCATCATCGGCCGCGAAGAAGCCATCGGCGTGAACATCGGCAGCCGCCGCCGCGACAGCGAATCAGCG CTGGCCGAAGAGCGCAGCCGCCTTGCCGGCCTGGAAACACGCTGGAGCGAAGAGAAGGCGTTGGTCGACGAGCTGCTGGC CACCCGCGCCAGCCTGCGCGCCGCCGCCGAGCCGGTGGACGACACCAGCCGCGAGGCCGGCGACGCCCGCCTGAGCGACG AGGAACACGCGGCCCAGCGCAGCAAGCTCGCCGAGCTGCAGAGCCGCCTGAGCGCCCTGCAGGGCGAAGACCCGCTGATC CTGCCGACCGTCGATTACCAGGCGGTGGCCTCGGTGGTCGCCGACTGGACCGGCATTCCGGTCGGGCGCATGGCGCGCAA CGAGATCGAGACCGTTCTCAAGCTGGACGCGCACCTGAAGAAACGCATCATCGGCCAGGACCACGCCCTGGAAATGATCG CCAAGCGCATCCAGACCTCCCGCGCCGGGCTCGACAACCCCAACAAGCCGATCGGCGTATTCATGCTCGCCGGCACCTCC GGCGTGGGCAAGACCGAAACCGCCCTGGCGCTGGCCGAAGCCCTGTATGGCGGTGAGCAGAACGTCATCACCATCAACAT GAGCGAGTTCCAGGAAGCCCACACGGTGTCCACCCTCAAGGGCGCGCCACCGGGCTACATCGGCTACGGCGAGGGCGGCG TACTGACCGAAGCGGTGCGCCGGCGCCCCTACAGCGTAGTGTTGCTCGACGAGGTCGAGAAGGCGCACCCGGATGTCCAC GAGATTTTCTTCCAAGTGTTCGACAAGGGCGTGATGGAAGACGGCGAAGGCCGCCAGATCGACTTCAAGAATACCCTGAT CCTGCTCACCACCAACGCCGGCACCGAGATGATCGCCGGGCTGTGCAGCGACCCGGAGCTGATGCCCGAGCCTGAAGGCA TCGCCAAGGCGCTGCGCGAGCCGCTGCTGAAGATCTTCCCGCCGGCCCTGCTCGGCCGCCTGGTGACCATCCCCTACTAC CCGCTGTCGGACGACATGCTCAAGGCCATCACCCGCCTGCAGCTGGAGCGCATCAAGAAGCGCATCGAAAGCACCCACAA GGTGCCGTTCAGTTACGACGATGCGGTGGTCGACCTGGTGGTGTCGCGCTGCACCGAGAACGAGAGCGGTGGCCGGCAGA TCGACGCGATCCTCACCAACAGCATGCTGCCGGACATGAGCCGCGAGTTCCTCGGCCGCCTGCTCGAAGGCAAACCGCTC GCCGGCGTGCAGGTCAGCGTGCAGAACCAGGATCTGCACTATGAGTTTGCGGCAACGCAGTAA Protein sequence : MSEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELSHWLHQILQLQDSDLHQIIRQFSIEPARLAKDITEALDRLPR GSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLIVGILKTPSLRNALLAISREFDKLRVETLTERFDEVVGASPEN ALTATDGFQAGAAPGEASGAIAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDDEIRQLVDILMRRRQNNPILTGEAG VGKTAVVEGFALRIVAGDVPPSLKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQSSPKPIILFIDEAHTLVGAGGA AGAGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVDEPSEHRAILMMRGVASTMEKHHQVQILDEA LEASVKLSHRYIPARQLPDKSVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELAIIGREEAIGVNIGSRRRDSESA LAEERSRLAGLETRWSEEKALVDELLATRASLRAAAEPVDDTSREAGDARLSDEEHAAQRSKLAELQSRLSALQGEDPLI LPTVDYQAVASVVADWTGIPVGRMARNEIETVLKLDAHLKKRIIGQDHALEMIAKRIQTSRAGLDNPNKPIGVFMLAGTS GVGKTETALALAEALYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRRPYSVVLLDEVEKAHPDVH EIFFQVFDKGVMEDGEGRQIDFKNTLILLTTNAGTEMIAGLCSDPELMPEPEGIAKALREPLLKIFPPALLGRLVTIPYY PLSDDMLKAITRLQLERIKKRIESTHKVPFSYDDAVVDLVVSRCTENESGGRQIDAILTNSMLPDMSREFLGRLLEGKPL AGVQVSVQNQDLHYEFAATQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 52 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-130 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-130 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psefu_0245 | YP_004472323.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 0.0 | 88 |
| Psefu_0245 | YP_004472323.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 9e-146 | 43 |
