Gene Information

Name : Psefu_2377 (Psefu_2377)
Accession : YP_004474437.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 2557716 - 2558507 bp
Length : 792 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: psb:Psyr_2593 ABC transporter; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGACCGCCATCGCCAGCCGCAACCTGACCCTGGCCTACCAGCGCCAGCCGATCATCGACAACCTCGACCTGGCGTTGCC
GCGCGGCCAGGTGACGGTGCTGATCGGCAGCAACGGCTGTGGCAAGAGCACGCTGCTGAAATCCTTCGCCCGGCTGCTCA
AGCCGCAGGCCGGCACCGTGATCCTCAACGGCGCCGACATCCAGCGCAAACCGACCGCCGCCGTGGCGCGGGAGCTGGCG
ATCTTGCCGCAGATGCCGGTAGCGCCCGAGGGCATCAGCGTGCGTCAGCTGGTCGCCCTGGGGCGCTACCCGTACCAGAG
CTGGATGCAGCAGTGGTCGGCCGAGGACGAAGCCGTGGTGGCCCGCGCACTGACCCGCACCGGCCTCGACGAGCTGGCCG
AACGGCCGGTCGATGCGCTGTCCGGCGGTCAGCGGCAGCGCGCCTGGATCGCCATGACCCTGGCCCAGGAGACCGAGTTG
GTGCTGCTCGACGAGCCGACCACCTTTCTCGACCTGGCCCACCAGATCGAGGTACTGGATCTGCTGCGCGAACTCAATCG
CCAGGAGGGCAAGACCATCGTCATGGTGCTGCACGACCTCAACCTGGCCTGTCGCTACGCCGACCACATGGTCGCCGTGC
ACCAGCGCACCGCCTACGCCCAGGGCAAGCCGGCGGACATCCTCAGCGAAGAACTGGTCAAGACGGTGTTCGACCTGGAT
TGCCGGATCATCCCCGACCCGTTCTTCCACACGCCGCTGTGCATTCCCTTCGGTCGGGACATTCCCCGATGA

Protein sequence :
MTAIASRNLTLAYQRQPIIDNLDLALPRGQVTVLIGSNGCGKSTLLKSFARLLKPQAGTVILNGADIQRKPTAAVARELA
ILPQMPVAPEGISVRQLVALGRYPYQSWMQQWSAEDEAVVARALTRTGLDELAERPVDALSGGQRQRAWIAMTLAQETEL
VLLDEPTTFLDLAHQIEVLDLLRELNRQEGKTIVMVLHDLNLACRYADHMVAVHQRTAYAQGKPADILSEELVKTVFDLD
CRIIPDPFFHTPLCIPFGRDIPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-54 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-59 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-59 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-59 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-51 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-55 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-55 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-55 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-55 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_2377 YP_004474437.1 iron-chelate-transporting ATPase BAC0164 Protein 1e-54 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_2377 YP_004474437.1 iron-chelate-transporting ATPase VFG0925 Protein 4e-63 51
Psefu_2377 YP_004474437.1 iron-chelate-transporting ATPase VFG1042 Protein 1e-54 47