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Name : Psefu_2262 (Psefu_2262) Accession : YP_004474323.1 Strain : Pseudomonas fulva 12-X Genome accession: NC_015556 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 2427279 - 2429537 bp Length : 2259 bp Strand : + Note : KEGG: pmy:Pmen_2068 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal DNA sequence : ATGTACAAAGACCTCAAGTTCCCGGTACTCATCGTTCATCGCGATATCAAGGCCGATACCGTGGCCGGCGAGCGGGTGCG GGCCATCGCCGCCGAGCTGGAACAGGACGGCTTCACCATTCTGTCCACCGCGAGCTCTGCGGAAGGCCATATCGTCGCCT CGACCCATCACGGGCTGGCCTGCATCCTGGTTGCCGCCGAAGGCGCCGGGGAAAACCGCCACCTGCTGCAGGACATGGTC GAGCTGATCCGCATCGCCCGACGCCGCGCGCCGCAGCTGCCGATCTTCGCTCTGGGTGAGCAGGTCACCATCGAAAACGC CCCGGCCGAAGCCATGGCCGACCTCAACCAGCTGCGCGGCATTCTCTATTTGTTCGAAGACACCGTGCCGTTCCTGGCGC GCCAGGTGGCCCGCGCCGCGCGCAATTACCTGGATGGCCTGCTGCCGCCGTTCTTCAAGGCGCTGGTGCAGCACACCGCA CAGTCCAACTATTCCTGGCACACGCCGGGCCACGGCGGCGGCGTGGCGTATCGCAAGAGCCCGGTCGGACAGGCGTTTCA CCAGTTCTTCGGCGAGAACACCCTGCGCTCGGACCTGTCGGTCTCGGTGCCCGAGCTTGGCTCGCTGCTCGACCATACCG GCCCTTTGGCCGCCGCCGAGGAGCGCGCTGCACGCAACTTCGGCGCCGACCATACCTACTTCGTGATCAACGGCACTTCG ACCGCCAACAAGATCGTCTGGCACTCGATGGTCGGCCGTGACGACCTGGTGCTGGTCGACCGCAACTGCCACAAGTCGAT TCTCCACGCCATCATCATGACCGGTGCGATTCCCCTGTACCTGTCGCCGGAGCGCAACGAGCTGGGCATCATCGGGCCGA TTCCGCTGAGTGAATTCACCCGCGAGTCGATCCAGGCCAAGATCGACGCCAGCCCGCTGGCTCGAGGGCGCGAGCCCAAG GTCAAGCTGGCGGTGGTGACCAACTCCACCTACGACGGCCTGTGCTACAACGCCGAGCTGATCAAACGCACCCTCGGTGA TTCGGTCGAGGTGCTGCACTTCGACGAAGCCTGGTACGCCTACGCCGCGTTCCACGAGTTCTATGCCGGCCGTTACGGCA TGGGCACCAGCCGCGAGGCCGGCGGCCCGATGGTGTTCACCACCCATTCGACCCACAAGCTACTCGCCGCCTTCAGCCAG GCCTCGATGATCCATGTGCAGGATGGTGCGCTACGCCAGCTCGACCGCGACCGCTTCAACGAAGCCTTCATGATGCATAT CTCCACCTCGCCCCAGTACGGCATCATCGCCTCGCTGGATGTGGCCTCGGCGATGATGGAAGGCCCGGCCGGTCGCTCGC TGATTCAGGAAACCTTCGACGAGGCGCTGAGCTTTCGCCGCGCGCTGGCTAACCTGGGGCAGAGCCTGAGCAGCGAGGAC TGGTGGTTCAGTATCTGGCAGCCGCCGCAGACCGAGGGCGCCGACGACGTGGCGACGCCAGACTGGCTGCTGCAGCCCGA GGCTGATTGGCACGGTTTCGGTGACGTGGCCGAAGACTACGTGCTGCTCGACCCGATCAAAGTGACCCTGGTGATGCCCG GCCTGACCGCCGGCGGCCGTCTCGACGAGCGCGGTATTCCCGCTGCGGTGGTCAGCAAGTTTCTCTGGGAGCGCGGCCTG GTGGTCGAGAAGACCGGCCTGTATTCGTTCCTGGTGCTGTTCTCCATGGGCATCACCAAGGGCAAGTGGAGCACGTTGCT TACCGAACTGCTGGAGTTCAAGCGCAGCTATGACGCCAACCTGCCGCTGAGTTCAGTGCTGCCTTCGGTGGCCCGCGAGG GCGCGCTGCGCTATCAGGGCATGGGCCTGCGCGACCTGTGCGATGCGCTGCACGACTGCTACCGCGAAAACGCCACAGCC AAATCCCTCAAGCGCATGTACACAGTGCTGCCGGAGATCGCCCTGAAACCGGCCGATGCCTACAACCAGCTGGTGCGCGG CGAGGTGGAGGAAGTTTTGGTCGACGACGTCGAAGGGCGCATCGCGGCGGTGATGCTGGTGCCGTATCCGCCGGGCATTC CGCTGATCATGCCGGGCGAGCGTTTCACCTCGGCCACCCGCTCGATCATCGACTATTTGCGCTTCGCCCAGGCCTTCGAG CAGCGCTTCCCGGGCTTCGACGCCGATGTGCACGGCCTGCAGCGCCATGAGGGCGAGCAGGGCAGTTACTACACGGTCGA CTGCATCATCGAGAAGTAG Protein sequence : MYKDLKFPVLIVHRDIKADTVAGERVRAIAAELEQDGFTILSTASSAEGHIVASTHHGLACILVAAEGAGENRHLLQDMV ELIRIARRRAPQLPIFALGEQVTIENAPAEAMADLNQLRGILYLFEDTVPFLARQVARAARNYLDGLLPPFFKALVQHTA QSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAAAEERAARNFGADHTYFVINGTS TANKIVWHSMVGRDDLVLVDRNCHKSILHAIIMTGAIPLYLSPERNELGIIGPIPLSEFTRESIQAKIDASPLARGREPK VKLAVVTNSTYDGLCYNAELIKRTLGDSVEVLHFDEAWYAYAAFHEFYAGRYGMGTSREAGGPMVFTTHSTHKLLAAFSQ ASMIHVQDGALRQLDRDRFNEAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLIQETFDEALSFRRALANLGQSLSSED WWFSIWQPPQTEGADDVATPDWLLQPEADWHGFGDVAEDYVLLDPIKVTLVMPGLTAGGRLDERGIPAAVVSKFLWERGL VVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDANLPLSSVLPSVAREGALRYQGMGLRDLCDALHDCYRENATA KSLKRMYTVLPEIALKPADAYNQLVRGEVEEVLVDDVEGRIAAVMLVPYPPGIPLIMPGERFTSATRSIIDYLRFAQAFE QRFPGFDADVHGLQRHEGEQGSYYTVDCIIEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 2e-127 | 42 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 9e-126 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psefu_2262 | YP_004474323.1 | lysine decarboxylase | VFG1670 | Protein | 1e-127 | 42 |
