Gene Information

Name : Psefu_2233 (Psefu_2233)
Accession : YP_004474294.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 2393974 - 2394420 bp
Length : 447 bp
Strand : +
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: psa:PST_0663 transcriptional regulator CadR; SMART: HTH transcriptional regulator, MerR

DNA sequence : 
ATGAAAATTGGTGAATTGGCGACGGTGACTGGCTGCCAGGTGGAAACCATCCGCTATTACGAGCGTGAAGGATTGCTGCC
CGCACCCCAGCGTAGCGAAGGCAATTACCGCCTTTACCTGCCGGAGCACGTCGAGCGGCTTACCTTCATCCGCAATTGCC
GCACCCTGGACATGACGCTCGACGAGATTCGCGAGCTGCTCAGCCTGCGCGGCCGTCCGGCAGAAAACTGCGAAGCCATC
AACACGCTGATCGACGAGCATATCGAGCACGTCAACGCGCGAATCGCCAGCCTGCAGTCGCTGCAGGAGCAACTGGTCGA
GCTGCGCAACAGCTGCCTGGCGGATCAGCAATCATCGCCGTGCGAGATCATCCGGCAACTCAGTACCAGCGATACGCTGC
ACGCCGAGAAGGATGTTTCTCATGTCGGCCGGGCGCATCGGCATTGA

Protein sequence : 
MKIGELATVTGCQVETIRYYEREGLLPAPQRSEGNYRLYLPEHVERLTFIRNCRTLDMTLDEIRELLSLRGRPAENCEAI
NTLIDEHIEHVNARIASLQSLQEQLVELRNSCLADQQSSPCEIIRQLSTSDTLHAEKDVSHVGRAHRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 9e-29 50
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-26 47
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 9e-27 47
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 6e-27 47
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 9e-27 47
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 6e-27 47
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 6e-27 47
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 6e-27 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_2233 YP_004474294.1 MerR family transcriptional regulator BAC0058 Protein 3e-39 66
Psefu_2233 YP_004474294.1 MerR family transcriptional regulator BAC0301 Protein 4e-32 55