Gene Information

Name : Psefu_2232 (Psefu_2232)
Accession : YP_004474293.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.3
Position : 2391445 - 2393895 bp
Length : 2451 bp
Strand : -
Note : TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: psa:PST_0664 cadmium translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-asso

DNA sequence :
ATGTCGAATTGCTGTGATCATGACCATGCCCCGAAACCTGCACGCCCTCAGGCGACCTGTTGCGCGAGCGATACGACGCC
GTCCTGCTGCACGCCGGGCAGCCCGTTGGTCGCGGGAATCAGCGAGCCAGCCGGCAGCCAGGCGGATCCTGCCCCTGAAA
GCAGTGCCCTGCGTATCGAACAGATGTGCTGCCCGACCGAGGAGAGCCTGATTCGCGGCAAGCTGCAGCCCATGTCCGAG
GTGCACGGCCTGCAGTTCAATCTGCTCAACCGCAGCCTTGTCGTCGAACATCAGGCCGGCGCCGCGCCGCAGGTGATCGC
GGCGATCGCCAGCCTGGGCATGCAGGCGCTCCCCCTGGCCGCCGAGACCCGCGTGCGTATCGATCAGATGGACTGCCCCA
CCGAGGAACGCCTGATCAGCGACAAGCTGGCCCGCCAGCCCGGCATCGAGGCGCTGCACTTCAACCTCATGCAGCGGGTG
CTGACCATTCGCCACCGCCCGGACGCTCTGGAGCCCGCCCTGCTGGCGATCCGCGAGCTCGGTTTCACCCCGCAACTCGA
AGGCGAAGGCCAGGCCGTGCGCGCCGAGCCTGTGGCCAGCGGCTTGCCATGGCGGCTGATCGGTGCCGGCGTGGTCGCCT
TCATCGCCGAACTGGTGCACTTCACCGACAGCGCGCCGGAGTGGGTGGTCGCACTGATCGCCCTGGGCGCCATCCTCACC
GCTGGGCTCGACGTCTACAAGAAGGGCTGGATCGCCCTGAAGAATTTCAACCTGAACATCAATGCGCTGATGAGCATCGC
CGTGACCGGCGCCGTGCTGATCGGGCAGTGGCCCGAGGCGGCCATGGTAATGGTGCTGTTCGCCATCGCCGAGCGGATCG
AGGCGAAATCCCTGGATCGCGCGCGCAACGCGATTCGTGGCCTGATGGCACTGACCCCGGAACAGGCGACGGTGCGCCAG
GCCGACGGCAGCTGGCAGGCGCTCGACGTCGCCCAGGTGGCCATCGGCAGCGTGGTGCGGGTGCGCCCCGGTGAGCGCAT
CGGCCTGGACGGCCAGGTGCTCGACGGGCATTCGACGGTGGACCAGTCGCCAATCACCGGGGAAAGCCTGCCCATCGAGA
AAACCGTAGGCGATACCCTGTTCGCCGGCACCATCAATCAGGGCGGCGCGCTGGAATACCAGGTCAGCGCCGCGGCCAGC
AACAGCGCCCTGTCACGCATCATCAAGGCCGTCGAGGAGGCCCAGGGCGCACGCGCACCGACGCAGCGCTTCGTCGACCG
TTTCGCACGCATCTACACGCCGCTGGTGTTCCTGCTCTCCCTGGCGGTGGCCGTGGTGCCCCCATTGTTATTAGGTGGCG
GTTGGTTCGACTGGGTGTATCGCGCCCTGGTCCTGCTCGTGGTCGCCTGCCCTTGCGCTCTGGTGATTTCCACCCCGGTA
AGCATCGTCAGCGGCCTCGCCGCAGCGGCGCGCAAGGGCATTCTGGTCAAGGGCGGCGTGCATCTGGAAAACGGCCGTCA
CATCACGCACCTGGCACTGGACAAGACCGGCACCCTCACCCACGGCAAGCCGGTGCAGACCGACTACCAGGCGCTGGGCG
AGGATGCCACCCGTTACCACACGCTCGCCGCCAGCCTGGCTGCGCGCTCCGATCACCCGGTCTCCCTGGCGGTAGCCAGT
GCAGCCCGGCAACAGGGTATCGAGCTGGTCGAGGTACAGGCATTCGAAGCCCTGGCCGGGCGCGGCGTGCGGGGCGTGAT
CGATGGCCAGCGCTACCAGTTGGGCAACCATCGCCTTCTCGAGGAGCTGGGCCTGTGTTCGGCGACGCTCGAAACCCGAC
TCGATGAACTCGAGCGCCAGGGCAAGACGGTGATCGTGCTCAGCGACAAAGCCCGCCCCCTGGCCCTGTTCGCCGTCGCC
GACACCTTGAAGGACAGCAGCCGCGAGGCCATCGCCAGCCTCCACGCCATGGGCGTCAAGACCGTCATGCTGACCGGCGA
CAACCAACACACCGCTCGAGCGATCGCCACTCAGGTCGGTATCGACGAGGCCCGCGGCGACCTGCTGCCCACCGATAAGC
TGGCAACCGTCGAAACCCTGCTCGCACAGAAAGGTGTGGTGGCCATGGTCGGCGACGGCATCAACGATGCCCCTGCCCTG
GCCCGTGCCGATGTCGGTTTCGCCATGGCGGCGATCGGCACCGACACGGCCATCGAAACCGCCGACGTAGCGATCATGGA
CGACGACCTGCGCAAGATCCCGGCGTTCATCTGCCTGTCTCAGCAGACCGCGGCGATCCTCAAGCAGAACATCGTGCTGG
CCCTGGGCATCAAGGCAGTCTTCCTGGCCATGACCGTCACCGGCCACGCCACCATGTGGATGGCGGTGTTCGCCGATGTG
GGCGTGAGCCTGCTGGTGGTATTCAACGGGTTGCGGTTGTTGCGCAAATAG

Protein sequence :
MSNCCDHDHAPKPARPQATCCASDTTPSCCTPGSPLVAGISEPAGSQADPAPESSALRIEQMCCPTEESLIRGKLQPMSE
VHGLQFNLLNRSLVVEHQAGAAPQVIAAIASLGMQALPLAAETRVRIDQMDCPTEERLISDKLARQPGIEALHFNLMQRV
LTIRHRPDALEPALLAIRELGFTPQLEGEGQAVRAEPVASGLPWRLIGAGVVAFIAELVHFTDSAPEWVVALIALGAILT
AGLDVYKKGWIALKNFNLNINALMSIAVTGAVLIGQWPEAAMVMVLFAIAERIEAKSLDRARNAIRGLMALTPEQATVRQ
ADGSWQALDVAQVAIGSVVRVRPGERIGLDGQVLDGHSTVDQSPITGESLPIEKTVGDTLFAGTINQGGALEYQVSAAAS
NSALSRIIKAVEEAQGARAPTQRFVDRFARIYTPLVFLLSLAVAVVPPLLLGGGWFDWVYRALVLLVVACPCALVISTPV
SIVSGLAAAARKGILVKGGVHLENGRHITHLALDKTGTLTHGKPVQTDYQALGEDATRYHTLAASLAARSDHPVSLAVAS
AARQQGIELVEVQAFEALAGRGVRGVIDGQRYQLGNHRLLEELGLCSATLETRLDELERQGKTVIVLSDKARPLALFAVA
DTLKDSSREAIASLHAMGVKTVMLTGDNQHTARAIATQVGIDEARGDLLPTDKLATVETLLAQKGVVAMVGDGINDAPAL
ARADVGFAMAAIGTDTAIETADVAIMDDDLRKIPAFICLSQQTAAILKQNIVLALGIKAVFLAMTVTGHATMWMAVFADV
GVSLLVVFNGLRLLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 65
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 8e-117 46
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 8e-117 46
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 3e-113 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_2232 YP_004474293.1 heavy metal translocating P-type ATPase BAC0298 Protein 0.0 61
Psefu_2232 YP_004474293.1 heavy metal translocating P-type ATPase BAC0455 Protein 4e-78 42