Gene Information

Name : Psefu_2154 (Psefu_2154)
Accession : YP_004474219.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 2293943 - 2294773 bp
Length : 831 bp
Strand : +
Note : KEGG: pwa:Pecwa_4019 alanine racemase domain protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: alanine racemase, N-terminal

DNA sequence :
ATGCCAACGAGATTCGACACGCAGACCGGCCATGACCGGCACGGATTCTACCCGCAAGCGGAAACGGTCGAGGATTTCCA
GCGTAACCTGGCCGCGGTGCAGGCGCGTATCGCTGCGGCTTGTCTCCGCTCGGGACGTGACCGCTCCACGGTGCGCCTGC
TGCCGGTCAGCAAGACCAAGCCAGAATCAAGCCTGCGTCTGGCTTACGCGGCGGGTTGCCGTTATCTGGGCGAAAACAAG
GTGCAGGAAGCCTTCAGCAAGTGGCAGGGCATGCAGGATCTGACTGATCTGCACTGGTCGGTCATCGGTCATCTGCAGAC
CAACAAGGCCAAGGTGGTGGCGCGTTTCGCCAGTGAGTTTCAGGCCTTGGACAGCCTGCGTCTGGCCGAGGCATTGGAGC
GGCGTCTGCAGACCGAAGGGCGAGGGCTGGACGTATTCGTGCAGGTCAATACCTCGGGTGAGGCGAGCAAGTACGGACTG
TCACCGGAAGAGGTGCCGGCATTCGTCAGCAAATTGTCCGCTTATCCGGCGCTGCGCGTACGGGGACTGATGACGCTGGC
GCTCTTTTCGGCCGAGGCGGAGCGGGTAAGGCAGTGCTTCATCCTGCTGCGCACACTGCGCGATCAATTGCGGCAAAGCG
CGCCTGCCAGTATCGGTCTGGACGAGTTGTCCATGGGCATGTCCGGTGACTTCGAGATCGCTATCGAGGAGGGCGCCACG
GTCGTGCGCGTCGGTCAGGCGATTTTCGGCGCACGTGTTCTGCCAGACAGCCACTACTGGCCTTCAGAGCCTGGCTCAGG
CGGTGGCAGCAGTGCTCGTCCTCTGAACTGA

Protein sequence :
MPTRFDTQTGHDRHGFYPQAETVEDFQRNLAAVQARIAAACLRSGRDRSTVRLLPVSKTKPESSLRLAYAAGCRYLGENK
VQEAFSKWQGMQDLTDLHWSVIGHLQTNKAKVVARFASEFQALDSLRLAEALERRLQTEGRGLDVFVQVNTSGEASKYGL
SPEEVPAFVSKLSAYPALRVRGLMTLALFSAEAERVRQCFILLRTLRDQLRQSAPASIGLDELSMGMSGDFEIAIEEGAT
VVRVGQAIFGARVLPDSHYWPSEPGSGGGSSARPLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-38 54
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-38 54
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-38 54
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-38 54