Gene Information

Name : Psefu_1724 (Psefu_1724)
Accession : YP_004473792.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1860124 - 1860321 bp
Length : 198 bp
Strand : -
Note : KEGG: pfs:PFLU2114 regulatory protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3

DNA sequence :
GTGATCAACCATGTGCGCGAATTGCGCAATGGCCAGGGCTGGTCCCAGGCTGAGCTGGGCGAACGCCTGGGCGTCTCCCG
GCAGACGGTGAACGCCATCGAAACCGGCCGCTATGACCCCAGCCTGCCCTTGGCCTTCAAGATCGCCCGGCTGTTCGGGC
GCCCTATCGAAGCCATCTTTCAGGCGCCCGACGCATGA

Protein sequence :
MINHVRELRNGQGWSQAELGERLGVSRQTVNAIETGRYDPSLPLAFKIARLFGRPIEAIFQAPDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-11 50
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-08 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-08 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_1724 YP_004473792.1 XRE family transcriptional regulator VFG2168 Protein 9e-09 50
Psefu_1724 YP_004473792.1 XRE family transcriptional regulator VFG2175 Protein 9e-09 50