Gene Information

Name : Psefu_1493 (Psefu_1493)
Accession : YP_004473563.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1611371 - 1612384 bp
Length : 1014 bp
Strand : +
Note : PFAM: ABC transporter permease; KEGG: hel:HELO_3346 ABC-type ABC transporter permease

DNA sequence :
ATGAGCAGCGCTGTAAAACCTGCTCGACTGACGCTGGCCGCTGCCCTGGCGTGGGTGAGTGCTGCCCTGGCGTTGCTGTG
CGTCGCCAGCCTGCTGATCGGTGCGGGGGAGGTGGGCATCCTGCGTAGCCTGTGGGCGCTGGTCGGCGCCGTGGATGACG
AGGCGCGCTTCGTGCTCTTCGAGCTGCGCCTGCCGCGCACCTTGCTCGGCGTGCTTGTCGGTGTGGCGCTGGGGGCGGCG
GGCGTGGTGCTGCAGTCCGCTACTCGCAACCCATTGGCCGAGCCCGGCCTGCTCGGCGTCAGCGCCGGGGCCTCGTTCGC
CGTGGTCGTTGCGATCAGCCTGGGCGCCAGCGCGGCCACCTTGAACCTCGGTGTGGCCATCACGGGTGCCATGGCCGGTT
GCCTACTGGTATTGCTGGTCACCCAGGTGCGCGGCGTCGGCGACGACCCGGTGCGCCTGGTACTGGCCGGTGCCGCGTTC
TCGGGCATCCTCACCGCGATCAGCACGCTGATTCTGCTGCACGACCAGCGCAGCTCCGACGAGATCCGCTTCTGGATCAT
CGGCGCCCTGGCCGGTCGACCCCAGGGCGTGCTGACCTGGAGCGCGCCTGGCGTGCTGCTCGGCCTGTTGCTGCTGGCGC
CGCTGATTCGTCCGCTGGCGGCCCTGGCCCTCGGCGAGAAGATGGCCACCGGGCTCGGCCATCATCCCGGCCTGACCCGC
CTGGGCGCCTTGCTCGGCGTCGCCGTGCTGGTCGGCACCGCGACGGCGGCGGCCGGGCCCATGGCCTTCGTCGGCCTGGT
AGTGCCCTTCGTGGCACGCCGCCTGGTGGGGCCAGACATCCGCCGCACCATCGGTTTGTCGCTGCTGCTCGGGCCGATCA
TCGTGCTGTTCGCCGACATCCTCTCGCGCCTGCTGGTCAGCCCCTACGAACTGCCGATCGGCGTGGTGACCGCGCTGATC
GGCGCGCCGGTACTGATCGCGGTGGTGCGCAGCCACAGGTTGCCGACCTTATGA

Protein sequence :
MSSAVKPARLTLAAALAWVSAALALLCVASLLIGAGEVGILRSLWALVGAVDDEARFVLFELRLPRTLLGVLVGVALGAA
GVVLQSATRNPLAEPGLLGVSAGASFAVVVAISLGASAATLNLGVAITGAMAGCLLVLLVTQVRGVGDDPVRLVLAGAAF
SGILTAISTLILLHDQRSSDEIRFWIIGALAGRPQGVLTWSAPGVLLGLLLLAPLIRPLAALALGEKMATGLGHHPGLTR
LGALLGVAVLVGTATAAAGPMAFVGLVVPFVARRLVGPDIRRTIGLSLLLGPIIVLFADILSRLLVSPYELPIGVVTALI
GAPVLIAVVRSHRLPTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 4e-08 43
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 4e-08 43
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 4e-08 43
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 4e-08 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_1493 YP_004473563.1 ABC transporter permease VFG0926 Protein 7e-17 45