Gene Information

Name : Psefu_1318 (Psefu_1318)
Accession : YP_004473388.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1443771 - 1445222 bp
Length : 1452 bp
Strand : -
Note : TIGRFAM: Pyruvate kinase; KEGG: pfl:PFL_4797 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like

DNA sequence :
ATGACCGTTCGCCGCACCAAAATCGTCGCCACCCTCGGCCCAGCCAGCAACTCGCCGCAGATGCTGGAAAAGTTGATCCT
GGCCGGGCTGGATGTTGCCCGCCTGAACTTCTCCCACGGCACCCCGGAAGAGCACAAGGCACGCGCCCAGCTGGTACGCG
ACATCGCCGCCAAGCATGGCCGCCACGTGGCTCTGCTGGGCGACCTGCAAGGCCCGAAGATCCGTATCGCCAAGTTCGCC
AACAAGCGTATCGAACTGCAGGTCGGTGACCGCTTCACCTTCTCCACCAGCCATCCGCTGACCGAAGGCAACCAGCAGGT
TGTCGGCATCGACTACCCGGATCTGGTCAAGGATTGCGGCGTGGGCGACGAACTGCTGCTCGACGATGGTCGCGTGGTCA
TGCGCGTGGAAAGCACCACCCCCGACACCCTCGAATGCGTCGTGCTGATCGGCGGCCCGCTGTCCGACCACAAGGGCATC
AACCGTCGCGGTGGCGGCCTGACCGCCCCGGCCCTAACCGAGAAAGACAAGGCCGACATCAAGCTCGCTGCCGAAATGGA
CCTGGACTACCTGGCCGTTTCCTTCCCCCGTGATGCGGCGGACATGGAATACGCCCGCCAGCTGCGTGACGAAGCCGGCG
GCAAGGCCTGGCTGGTCGCCAAGATCGAGCGTGCCGAAGCGGTAGCCAACGACGAAACCCTCGACGGTCTGATCAAGGCC
AGCGACGTGGTGATGGTCGCCCGTGGTGACCTCGGTGTGGAAATCGGCGACGCCGAGCTGGTCGGCATCCAGAAGAAGAT
CATTCTGCACGCACGTCGCCACAACAAGGCGGTGATCGTCGCGACCCAGATGATGGAGTCGATGATCCAGAACCCGATGC
CGACCCGTGCCGAGGTGTCCGACGTAGCCAACGCCGTGCTCGACTACACCGACGCGGTCATGCTGTCGGCCGAGAGCGCC
GCCGGCGCCTACCCGCTGGAAGCCGTGCAGGCCATGGCGCGTATCTGCCTGGGCGCCGAGCGTCACCCGACCGGCAAGAG
CTCCAGCCATCGCATCGGCAAGACCTTCGAGCGCTGCGACGAGAGCATCGCCCTGGCGGCCATGTACACCGCCAACCACT
TCCCGGGCGTGAAGGCGATCATCGCCCTGACCGAAAGCGGTTACACCCCGCTGGTCATGTCGCGCATCCGCTCCTCGGTG
CCGATCTACTCCTTCTCCCCGCACCGCGATACCCAGGCGCGCTCGGCGATGTTCCGCGGCGTGTACACCATCCCGTTCGA
CCCGGCGGCCCTGCCGGCCGGCGAAGTCAGCCAGGCGGCGGTGGACGAGCTGCTCAAGCGCGGCCTGGTCGAGCAAGGCG
ACTGGGTGATCCTCACCAAGGGCGACAGCTACCACACCATTGGTGGCACCAACGGCATGAAGATCCTGCATGTCGGTGAC
GTTCTGGTCTGA

Protein sequence :
MTVRRTKIVATLGPASNSPQMLEKLILAGLDVARLNFSHGTPEEHKARAQLVRDIAAKHGRHVALLGDLQGPKIRIAKFA
NKRIELQVGDRFTFSTSHPLTEGNQQVVGIDYPDLVKDCGVGDELLLDDGRVVMRVESTTPDTLECVVLIGGPLSDHKGI
NRRGGGLTAPALTEKDKADIKLAAEMDLDYLAVSFPRDAADMEYARQLRDEAGGKAWLVAKIERAEAVANDETLDGLIKA
SDVVMVARGDLGVEIGDAELVGIQKKIILHARRHNKAVIVATQMMESMIQNPMPTRAEVSDVANAVLDYTDAVMLSAESA
AGAYPLEAVQAMARICLGAERHPTGKSSSHRIGKTFERCDESIALAAMYTANHFPGVKAIIALTESGYTPLVMSRIRSSV
PIYSFSPHRDTQARSAMFRGVYTIPFDPAALPAGEVSQAAVDELLKRGLVEQGDWVILTKGDSYHTIGGTNGMKILHVGD
VLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 5e-62 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-62 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-62 45
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-62 45
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 2e-75 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_1318 YP_004473388.1 pyruvate kinase VFG0479 Protein 5e-63 45