Gene Information

Name : Psefu_1127 (Psefu_1127)
Accession : YP_004473198.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1229973 - 1230656 bp
Length : 684 bp
Strand : -
Note : KEGG: pmy:Pmen_2476 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduc

DNA sequence : 
ATGCGCATTCTGGTGATCGAAGACAACCGCGACATCCTGGCCAATATCCTCGATTACCTGCAGCTCAAGGGGTACACGGC
CGACTGCGCCCAGGACGGGTTGAGCGGCCTGCACCTGGCCACGCAAGGGCACTACGACCTGATCGTGCTGGACATCATGC
TGCCCGGGCTGGACGGCTATCAGCTGTGCCGCCGCCTGCGTGAAGAAGCGCGCAGCAGCATCCCGATCCTCATGCTCACC
GCCCGCGATGCCCTGGAAGATCGCCTGCAGGGCCTGAGCGCCGGCGCCGACGATTACCTGATCAAGCCCTTCGCGCTGTC
CGAGCTGGTAGCGCGCATCGAAGCCATTTTGCGCCGGTCCCAGGGCAATCGCCGGCGTTTGCTGGAAGTCGCGGACCTTG
CCTACGACCTGGACATGCTCAGCGTGACCCGCGCCGGGCAACCCATCAAACTCAACCCGCTGGGCATGAAGCTGTTGATG
ATCCTGATGCAGCGCTCGCCCGCCGTGGTGCGCCGCGAGGCGCTGGAAGAGGCCCTGTGGGGCGACGACTGCCCCGACAG
CGACAGCCTGCGCAGCCACGTGCACCAGTTGCGCCAGGCCATCGACAAGCCTTTCGCCACCGCCCTGCTGCACACCGTGC
ATGGCGTGGGCTACCGGCTGGCGGCGAACCCCGATGCAAAGTAA

Protein sequence : 
MRILVIEDNRDILANILDYLQLKGYTADCAQDGLSGLHLATQGHYDLIVLDIMLPGLDGYQLCRRLREEARSSIPILMLT
ARDALEDRLQGLSAGADDYLIKPFALSELVARIEAILRRSQGNRRRLLEVADLAYDLDMLSVTRAGQPIKLNPLGMKLLM
ILMQRSPAVVRREALEEALWGDDCPDSDSLRSHVHQLRQAIDKPFATALLHTVHGVGYRLAANPDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-39 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_1127 YP_004473198.1 two component transcriptional regulator, winged helix family BAC0197 Protein 6e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_1127 YP_004473198.1 two component transcriptional regulator, winged helix family VFG0596 Protein 3e-39 44