Gene Information

Name : Psefu_1108 (Psefu_1108)
Accession : YP_004473180.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Unknown
Product : glycine/betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : 3.6.3.32
Position : 1207338 - 1208537 bp
Length : 1200 bp
Strand : +
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: glycine betaine/L-proline transport ATP-binding subunit; KEGG: mes:Meso_2529 glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core

DNA sequence :
GTGAACGAACGTCTCAAGATAGAAAACCTGTACAAGGTTTTCTCCCCCGCACCCGAGAGAGCCATGGAGCTTTTGAGGCA
GGGGGTTAGCAAGGACAGGATTCTGGCTGAAACCAGCGCGGTTGTTGGTCTGAACGATGTCTCCCTTTCCATACCCAGTG
GATCGATCTATATGATCATGGGGCTTTCCGGCTCAGGAAAGTCGACGCTGGCGCGCTGCATCAATCGTCTGAACGAACCT
ACCGCCGGGAAGATCATTCTTGACGGTCAGGACATCGTTCCTCTGAACGAGAAAGACCTGCGAGAGGTTCGCCGCACGCG
CATGTCAATGGTCTTCCAGCACTTTGCGTTGCTTCCCAATCGCACGATCGTCGAGAACACCGAATTTGGTCTGAAGCTGG
GAGGTATCTCGCAGACGCAGCGCCGCAAGCGTGCCGAGGAAGTGCTGTCGATTGTAGGTCTGGAAAAGTGGGCGCACCAT
TATCCCCACGAGCTTTCTGGCGGTATGCGTCAGCGTGTAGGGCTGGCCAGGGCGCTGGCTACCGATGCTGACGTACTCAT
CATGGACGAGGCTTTCAGCGCACTGGATCCGCTCATCCGTAGCGAAATGCAAGATGAGCTGCTGCGTCTGCAGCGCACGC
TGCAGAAAACCATTCTCTTCATCACCCACGATTTCCAGGAAGCTCTTAAGCTCGGCACCCGCATCGCGATCATGCGCGAT
GGCCAGGTTGTACGAGAGGGGACACCACAGTCGATCGTAACGGCACCTGGCAGTGACTACGTCTGTGGATTCACTCGCGA
GGTTGATCGCTCCCGGCTCTTCGACGCCCGATCCATCATGCAGTCTGCTGACGTCTTGAGTGTTGTCGATGGCTATCAAG
TTGTGGGCAGCAATGCGGGGGCGTCGTCAGCGTTTGTCCTCGATAACAATCGCCGTGTCGTCGGCACGCTTGATGCCGAA
GGCCTGATTCACGTCAGCGCGGGCAAGTCACCTGCTGCTGTGATGTCTTCCAGCTTCGTTCAGCTTGCCGAGAGCACCAA
GCTTATCGACGCGTCCCGCCTTCTGAAGTCGGCCCCCCATGCCGCGGTGATCGACGACAGCGGATCTTTCATTGGCACTG
TTGGAGCCGGCAACATTCTGGAATGCATTGCCACCGTGGCAACTCCGACGCCCCTGACCGAAGGTGAGCAAAATGCTTGA

Protein sequence :
MNERLKIENLYKVFSPAPERAMELLRQGVSKDRILAETSAVVGLNDVSLSIPSGSIYMIMGLSGSGKSTLARCINRLNEP
TAGKIILDGQDIVPLNEKDLREVRRTRMSMVFQHFALLPNRTIVENTEFGLKLGGISQTQRRKRAEEVLSIVGLEKWAHH
YPHELSGGMRQRVGLARALATDADVLIMDEAFSALDPLIRSEMQDELLRLQRTLQKTILFITHDFQEALKLGTRIAIMRD
GQVVREGTPQSIVTAPGSDYVCGFTREVDRSRLFDARSIMQSADVLSVVDGYQVVGSNAGASSAFVLDNNRRVVGTLDAE
GLIHVSAGKSPAAVMSSSFVQLAESTKLIDASRLLKSAPHAAVIDDSGSFIGTVGAGNILECIATVATPTPLTEGEQNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 7e-77 45