Gene Information

Name : Psefu_1046 (Psefu_1046)
Accession : YP_004473118.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Unknown
Product : tyrosine recombinase xerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1131567 - 1132463 bp
Length : 897 bp
Strand : +
Note : TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; Tyrosine recombinase XerD; KEGG: pmy:Pmen_3396 site-specific tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence : 
ATGTCCGCTGTCGACCATCCATTGATCGAGCGTTTCATCGAGGCCTTGTGGCTGGAAAAGGGCCTGTCCGCCCATACCCA
GTCGGCTTATCGCAGCGACCTGGCGCTGCTCAATGGCTGGCTGCAGGCCCGCGGCGTCGAGCTGCAATCGGTGGGTCGCG
AGGTACTGCTCGATCACCTGGCCTGGCGCATGAATGAAGGCTACAAGGCGCGCTCCACGGCGCGGCTGATCTCCGGCATG
CGCGGCTTCTACCGCTTCCTGCTGCGCGAGGGCGTGATCGATACCGATCCTACGCTGCAGGTGGATATGCCGCAGCTTGG
CCGGCCGCTGCCAAAATCGCTTTCCGAGGCCGATGTCGAGGCGTTGCTGGCTGCACCGGATCTGGACGACCCCATCGGCC
TGCGTGATCGCGCCATGCTCGAAGTGTTGTACGCCTGTGGGCTGCGGGTCAGCGAGCTGGTTGGCCTGACGCTCGAGCAG
GTCAATCTGCGCCAGGGCGTGCTGCGGGTATTCGGCAAGGGCAGCAAGGAGCGTCTGGTGCCCATGGGCGAGGAGGCCAT
CGGCTGGGTCGAGCGCTATTGCCGCGAGGCGCGCCCGGCGCTGCTGGCCGGTCGGCCGGCGGATGTGCTGTTTCCCAGCT
TGCGCGGCGAGCAGATGACCCGGCAGACCTTCTGGCACCGCATCAAGCATCACGCCCAGGTGGCGGGTATCGCCAAGTCG
CTGTCGCCGCATACCCTGCGCCATGCCTTCGCGACTCATCTGCTCAATCACGGCGCGGATCTGCGCGTGGTGCAGATGCT
GCTCGGCCACAGTGATCTGTCCACCACGCAGATCTACACCCATATCGCCCGCGCGCGTCTGCAGGCCCTGCATGCCCAGC
ATCATCCGCGCGGCTGA

Protein sequence : 
MSAVDHPLIERFIEALWLEKGLSAHTQSAYRSDLALLNGWLQARGVELQSVGREVLLDHLAWRMNEGYKARSTARLISGM
RGFYRFLLREGVIDTDPTLQVDMPQLGRPLPKSLSEADVEALLAAPDLDDPIGLRDRAMLEVLYACGLRVSELVGLTLEQ
VNLRQGVLRVFGKGSKERLVPMGEEAIGWVERYCREARPALLAGRPADVLFPSLRGEQMTRQTFWHRIKHHAQVAGIAKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARARLQALHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-64 62
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-64 62