Gene Information

Name : Thexy_0742 (Thexy_0742)
Accession : YP_004470461.1
Strain : Thermoanaerobacterium xylanolyticum LX-11
Genome accession: NC_015555
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 787648 - 788427 bp
Length : 780 bp
Strand : +
Note : PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: ribonuclease phosphorolytic, bacterial-type; HAMAP: ribonuclease phosphorolytic, bacterial-type; KEGG: ttm:Tthe_2078 ribonuclease PH

DNA sequence :
ATGAAAAGAGTAGATGGAAGAGATTCCAGATCATTAAGACCTATAAAGATAACGAGAAATTTCAACAGATACGCAGAAGG
ATCTGTTTTGATAGAAGTCGGCAATACAAAGGTCATTTGCACAGCATCAATTGAAGATAAAGTACCGCCATTTCAAAAAG
GGACTGGCAAGGGATGGATTACAAGTGAGTATTCAATGATTCCGAGAGCTACTGAAACCAGAACACAGAGGGAGTCCACA
AAAGGCAAACAATCAGGACGTACCATGGAAATCCAAAGGCTCATTGGAAGAGCATTGAGAGCTGTTGTCGATTTAGATGC
GTTAGGTGAGAAGACGATATGGATTGACTGCGATGTAATACAGGCTGATGGCGGAACCAGGACAGCTTCCATCACAGGTT
CGTTTGTAGCACTTGTAGATGCCATGAATAAACTTAAGGAAAAGGGCGCCATAAGTAAACTCCCTATAAAAAGCTTTGTC
GCTGCTGTAAGTGTAGGAATTGTAGGCAATGAGAAGCTTTTAGATCTTTGTTACTTAGAAGATAGCAATGCGCACGTTGA
CATGAACATCGTCATGACGGATAAAGGCGAATTCATCGAGATACAAGGAACTGGTGAAGGTGGGCCTTTTAGCAAAAGTG
ATTTTTCAGAGCTTTTAGAATTAGCGGAGGAAGGCTTGAATAAAATCATACAGGTTCAAAAAGAATCATTAGGAGATATA
TCATTAGAAATTGGAGTTGAAAGCGATGAAAATAGTTGTAGCGAGCCACAACAAGCATAA

Protein sequence :
MKRVDGRDSRSLRPIKITRNFNRYAEGSVLIEVGNTKVICTASIEDKVPPFQKGTGKGWITSEYSMIPRATETRTQREST
KGKQSGRTMEIQRLIGRALRAVVDLDALGEKTIWIDCDVIQADGGTRTASITGSFVALVDAMNKLKEKGAISKLPIKSFV
AAVSVGIVGNEKLLDLCYLEDSNAHVDMNIVMTDKGEFIEIQGTGEGGPFSKSDFSELLELAEEGLNKIIQVQKESLGDI
SLEIGVESDENSCSEPQQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-62 57