Gene Information

Name : Thexy_0302 (Thexy_0302)
Accession : YP_004470030.1
Strain : Thermoanaerobacterium xylanolyticum LX-11
Genome accession: NC_015555
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 319260 - 321692 bp
Length : 2433 bp
Strand : +
Note : KEGG: ttm:Tthe_0400 ATPase AAA-2 domain protein; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGGCAATGTTTGGCAGATTTTCGGAAAAAGCACAAAAAGTGCTTTATCAAGCACAGGAGGAAGCTCGCTCACTTTACCA
CAATTACGTGGGAACGGAGCATATCCTTTTAGGACTTATTAAAGAAGAAGATGGAATAGCATCGCGGGTTTTAAAAAGCC
TTGGTGTCACTTACGAAGATATAAGAGCAAAGGTAGAATCACTTATTGGAATGGGAAATGTGCCTGGCGATGTGGTAGGA
TATACGCCAAGAGCAAAGAGGGTTTTAGAGCTTAGCTTTGCTGAGGCCAGAAGGTTTAATACAAATTACATCGGAACAGA
GCACATCTTATTGGGACTTATTAGAGAAGGTGAAGGCGTAGCAGTAAGGATTTTGATGGAGTTAGGTGTAGACTTCAACA
GAGTCAGAGAAGAAATAGTAAAGATGGTAAGCGAAGAACCTTCTGGCACTACAAATAAAGCGCAAAGAGCTAAGAATACA
AATACACCTAACTTGAATCAGTTTGGAAGAGATCTTACAGAACTTGCAAGGGAAGGAAAGCTTGATCCTGTCATTGGACG
CGAAAAGGAGATAGAAAGAGTAATACAGATTTTAAGCAGAAGGACTAAAAACAATCCATGCCTTATTGGCGAACCTGGGG
TCGGTAAGACTGCAATCGCCGAAGGATTGGCAGAGGCCATCGAAAGTGGTACTATACCGGAGATTTTAAAGGGCAAACGG
GTTGTAACATTAGATATGGCTTCAATGGTTGCAGGCACAAAGTATAGAGGAGAATTTGAGGATAGGCTGAAAAATGTATT
GAATGAGGTCATCAAGGCAGGAAATGTCATACTTTTTATAGATGAGCTTCACACTATAATAGGTGCTGGTGCGGCAGAAG
GTGCCATAGACGCATCTAATATCTTAAAACCAGCCCTTGCGAGAGGAGAGATACAAGTCATTGGTGCTACTACAATCGAT
GAATACAGAAAGTACATTGAAAAAGATCCTGCTCTCGAAAGGAGATTTCAACCTATAATGGTTGAAGAGCCTTCTGTTGA
AGAAACGATAGAAATATTAAAAGGACTTAGGGACAAGTATGAAGCACATCACAGGATAAAGATTACTGATGAAGCGATTG
AAGCAGCAGCAAAACTTTCACACAGGTATATAACAGATAGATTCCTTCCTGATAAGGCTATAGACCTTATAGATGAAGCT
GCGTCGCGAGTCAGACTTAAGACAGTTACAGCACCGCCAGAGATAAAAGAATTGGAAGATAAATTAAATATGCTTAATAA
AGATAAAGAAGAGGCTATAAGGACACAAGAGTACGAAAAAGCCGCTAAGATAAGAGATGAAGAACAAAAAGTTAAAGAGC
AACTGGAAAACTTAAAATCAAAATGGCAGCAGAATTCATTAGTTAAAGAAAAAAGCGTTGGAGCTGAAGAAATTTCACAA
ATTGTATCCCTTTGGACTGGCATTCCAACACAGAAGCTTGCACAAGAAGAATCTGAAAGGCTTTTGCATTTGGAAGAGAT
ACTGCATAAACGCGTAATAGGACAGGATGAAGCGGTGGACGCGGTGGCAAGAGCAATAAGGAGGGCAAGAGTTGGACTTA
AGGATCCGAAAAGACCTATTGGATCGTTTATATTCTTAGGACCTACAGGTGTCGGAAAGACAGAGCTTAGCAAAGCGTTA
GCAGAAGCCATGTTTGGAGACGAATCAGCGATAGTCAGAATAGATATGTCTGAGTACATGGAAAAATTCTCTGTATCAAG
GCTTATCGGTTCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGAGAGCTTACAGAAAAAATAAGAAGAAAGCCATATT
CTGTAATTTTGTTTGACGAAATTGAAAAAGCTCATCCAGATGTGTTTAATATATTGTTGCAAATATTGGATGATGGAAGG
CTGACAGATTCAAAAGGCAGAACGGTAGATTTCAAAAATACACTCATAATAATGACTTCCAATGTTGGAGCACAGCTTAT
TAAGAAGCAGACGACTTTAGGTTTTATGCCTGAAAGCAACGCAGAAAAAGAATCGTATGAAAAGATGAAGGAAAACATCT
TAGAGGAGCTTAAAAAATCATTTAGGCCTGAATTTTTAAACAGGATTGATGATATCATTGTATTCCGTCAACTGACGCAG
GATGACATAAGGAAGATTACTGATTTGATGATCGCTGATTTGAATAAGAGGCTTAAAGATAACAACATAAGCCTTGAATT
TACAGATGATGCAAAAGAAGAACTTCTTAAAGAGGGCTATGATGTGACTTACGGTGCAAGGCCATTGAGAAGGGCTATAC
AGAAAGTTGTTGAAAGTGAGCTTTCTGAGCTTATGCTGAAAGGCGAAATAAAATCTGGAGATAAAGTGTTAGTTAAATTA
AAAGACGGTAAATTTGATTTTACGAAAGTTTAA

Protein sequence :
MAMFGRFSEKAQKVLYQAQEEARSLYHNYVGTEHILLGLIKEEDGIASRVLKSLGVTYEDIRAKVESLIGMGNVPGDVVG
YTPRAKRVLELSFAEARRFNTNYIGTEHILLGLIREGEGVAVRILMELGVDFNRVREEIVKMVSEEPSGTTNKAQRAKNT
NTPNLNQFGRDLTELAREGKLDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIAEGLAEAIESGTIPEILKGKR
VVTLDMASMVAGTKYRGEFEDRLKNVLNEVIKAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTID
EYRKYIEKDPALERRFQPIMVEEPSVEETIEILKGLRDKYEAHHRIKITDEAIEAAAKLSHRYITDRFLPDKAIDLIDEA
ASRVRLKTVTAPPEIKELEDKLNMLNKDKEEAIRTQEYEKAAKIRDEEQKVKEQLENLKSKWQQNSLVKEKSVGAEEISQ
IVSLWTGIPTQKLAQEESERLLHLEEILHKRVIGQDEAVDAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKAL
AEAMFGDESAIVRIDMSEYMEKFSVSRLIGSPPGYVGYEEGGELTEKIRRKPYSVILFDEIEKAHPDVFNILLQILDDGR
LTDSKGRTVDFKNTLIIMTSNVGAQLIKKQTTLGFMPESNAEKESYEKMKENILEELKKSFRPEFLNRIDDIIVFRQLTQ
DDIRKITDLMIADLNKRLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRRAIQKVVESELSELMLKGEIKSGDKVLVKL
KDGKFDFTKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thexy_0302 YP_004470030.1 ATPase AAA VFG0079 Protein 0.0 62
Thexy_0302 YP_004470030.1 ATPase AAA VFG0080 Protein 4e-140 52