Gene Information

Name : Thexy_2392 (Thexy_2392)
Accession : YP_004472058.1
Strain : Thermoanaerobacterium xylanolyticum LX-11
Genome accession: NC_015555
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2514253 - 2514699 bp
Length : 447 bp
Strand : -
Note : KEGG: ttm:Tthe_2734 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding

DNA sequence :
ATGTTGAATAAGGTTATATTGATAGGCCGTTTGACTAAAGATCCTGTCCTTAAGTATGCTTCTGCAAACATGGTTCCTGT
GACCACATTTACACTTGCTGTCAATAGGAATTACACGCAGCAGAACGGAGACAGGCTGGCTGATTTTATACCCATCGTTA
CATGGAGAAAGCTGGCAGAAGTTTGTGGAAATAATCTTAAAAAGGGAAGATTGGTGGCTGTGTCCGGCAGCATTCAAACT
CGCACATGGGATGATAATAGCGGCAATCGCCACTGGGTTACGGAAGTTGTGGCAGACGAAGTCAAATTTTTGGACTCAAA
TAAATCCAGCGGTAGCGATCTTATGCCAGATCTAAGTAAGGATATTCATAATTTTGATATCGACTTAGATGGCGGCGATT
TTGATGGGTTCAGTCCGGTAGAGTCAGAAGATGATCTTCCATTCTAA

Protein sequence :
MLNKVILIGRLTKDPVLKYASANMVPVTTFTLAVNRNYTQQNGDRLADFIPIVTWRKLAEVCGNNLKKGRLVAVSGSIQT
RTWDDNSGNRHWVTEVVADEVKFLDSNKSSGSDLMPDLSKDIHNFDIDLDGGDFDGFSPVESEDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-24 55
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 8e-24 54
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 9e-25 54
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 7e-21 53
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-23 53
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 6e-23 53
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-24 48
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-24 48
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-23 47
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-24 47
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-24 47
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 1e-23 46