Gene Information

Name : Thexy_2149 (Thexy_2149)
Accession : YP_004471829.1
Strain : Thermoanaerobacterium xylanolyticum LX-11
Genome accession: NC_015555
Putative virulence/resistance : Unknown
Product : Xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 2241090 - 2242409 bp
Length : 1320 bp
Strand : -
Note : PFAM: Xylose isomerase, TIM barrel domain; TIGRFAM: Xylose isomerase, bacterial type; HAMAP: Xylose isomerase; KEGG: ttm:Tthe_2492 xylose isomerase

DNA sequence :
ATGAATAAATATTTTGAGAACGTATCTAAAATAAAATATGAAGGACCAAAATCAAACAATCCTTATTCTTTTAAATTTTA
CAATCCTGAGGAAGTAATCGATGGTAAGACGATGGAGGAGCATCTTCGCTTTTCTATAGCTTATTGGCACACTTTTACTG
CTGATGGAACAGATCAATTTGGCAAAGCTACCATGCAAAGGCCATGGAATCACTATACAGATCCTATGGACATAGCTAAA
GCAAGGGTAGAGGCAGCATTTGAGTTTTTTGATAAGATAAATGCACCGTATTTCTGCTTCCATGATAGAGATATTGCCCC
TGAAGGAGACACTCTTAGAGAGACGAACAAAAATTTAGATACAATAGTTGCTATGATAAAGGATTACTTGAAGACCAGCA
AGACGAAAGTTTTGTGGGGTACTGCGAATCTTTTCTCCAATCCAAGATTTGTGCATGGTGCATCAACGTCTTGCAATGCC
GATGTTTTCGCATATTCTGCATCACAAGTCAAAAAAGCACTTGAGATTACTAAGGAGCTTGGTGGCGAAAACTACGTATT
CTGGGGTGGAAGAGAAGGATATGAGACACTTCTCAATACAGATATGGAGTTTGAGCTTGATAATTTTGCAAGATTTTTGC
ACATGGCTGTTGATTATGCAAAGGAAATCGGCTTTGAAGGCCAGCTCTTGATTGAGCCGAAGCCAAAGGAGCCTACAAAG
CATCAATACGACTTTGACGTGGCAAATGTATTGGCATTCTTGAGAAAATACGATCTTGACAAATATTTCAAAGTTAATAT
CGAAGCAAATCATGCAACATTAGCATTCCATGATTTCCAGCATGAGCTAAGATACGCCAGAATAAACGGTGTATTAGGAT
CGATTGACGCAAATACAGGTGATATGCTATTAGGCTGGGATACAGATCAGTTCCCTACAGATATACGCATGACAACACTT
GCTATGTATGAAGTCATAAAGATGGGCGGATTTGACAAAGGTGGACTCAATTTCGATGCGAAAGTAAGACGTGCTTCATT
TGAGCCAGAAGATCTTTTCTTGGGTCACATAGCAGGAATGGATGCTTTTGCAAAAGGCTTCAAAGTGGCTTACAAGCTTG
TAAAAGATGGCGTTTTTGACAAGTTCATCGAGGAAAGATATGCAAGCTACAAAGATGGCATAGGTGCAGATATTGTAAGT
GGAAAAGCTGATTTTAGAAGCCTTGAGAAGTACGCATTAGAGCACAGCCAGATTGTCAACAAATCAGGAAGACAAGAGCT
ATTAGAATCAATCCTAAATCAGTATTTGTTTGCAGAATAA

Protein sequence :
MNKYFENVSKIKYEGPKSNNPYSFKFYNPEEVIDGKTMEEHLRFSIAYWHTFTADGTDQFGKATMQRPWNHYTDPMDIAK
ARVEAAFEFFDKINAPYFCFHDRDIAPEGDTLRETNKNLDTIVAMIKDYLKTSKTKVLWGTANLFSNPRFVHGASTSCNA
DVFAYSASQVKKALEITKELGGENYVFWGGREGYETLLNTDMEFELDNFARFLHMAVDYAKEIGFEGQLLIEPKPKEPTK
HQYDFDVANVLAFLRKYDLDKYFKVNIEANHATLAFHDFQHELRYARINGVLGSIDANTGDMLLGWDTDQFPTDIRMTTL
AMYEVIKMGGFDKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKLVKDGVFDKFIEERYASYKDGIGADIVS
GKADFRSLEKYALEHSQIVNKSGRQELLESILNQYLFAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 2e-124 59
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 1e-124 59