Gene Information

Name : Thexy_0020 (Thexy_0020)
Accession : YP_004469756.1
Strain : Thermoanaerobacterium xylanolyticum LX-11
Genome accession: NC_015555
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 21687 - 22769 bp
Length : 1083 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; riboflavin-specific deaminase, C-terminal; 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase, archaeal; KEGG: ttm:Tthe_0020 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunction

DNA sequence :
ATGGAGAAATACATGAAAAGGGCATTGCAGCTTGCTAAACTTGGTGTAGGACACACAAACCCAAATCCTTTAGTAGGAGC
TGTAATTATTAAAGATGGCAGGATAATAGGTGAAGGCTATCATGAATACTATGGAGGACCACATGCAGAAATAAATGCAT
TAAAAAACGCTAAAGAAGATGTAAATGGAGCCACGCTTTATGTGACATTGGAACCATGTTGCCATCATGGAAAAACACCA
CCTTGCGTCGATGCTGTCATAAAATCAGGCATAAAAAATGTTTTTATCGCTATGGAGGATCCAAATGAACTTGTAGCAGG
AAGGGGAATTAAAAAGCTTGAAGAAGCTGGTTTAAATGTTTATACTGGATTGTTAAAAGATGAAGCAGAGAAATTGAATG
AAGTATTTATAAAGTACATTACAAGTAGAGAACCTTATGTAATATTAAAATCCGCTATGACAATTGATGGAAAGATATCA
ACTTTTACAGGCGATTCTAAGTGGATAACAAATGAAAAATCAAGGGAGTATGTCCATAAAGTTAGAGGTAGCGTTATGGC
AATAATGGTAGGTATTAATACAGTTATAAAAGATAATCCACATCTTACCGTTAGATTGCAAGGATATAAAAACCCTTTAA
GAGTTATTGTGGATAGTCACGGCAGGATTCCATTAGATGCAAATGTCATCATTGATAAATCTGCTAAGACATTAATAGCT
ACAACAGATATGATGCCACATGATAAGGTGAAAGCTTTGAAGGATTTGGGTGTTGATGTGGTTACAATCGAAAAAAAAGA
TAATAAAGTCCATCTGAATAAATTGATCTATACGTTAGGGGAAAGAGGGATAGATAGTATTCTCATAGAAGGTGGAGGAA
CTCTCAACTATTCTGCTTTAAAAGAAGGAATAGTAGACAAAGTTATGTTTTATATTGCTCCCAAAATAATAGGTGGAAGC
AATTCATTGACGCCTGTGGAAGGTGATGGCATTGCTTTGATTAAAGACGCAATAATGATTGAAAAGATAGATATAAAAAA
ATTTGACGATGACATACTTATAGAAGGTTATATAAAAAAGTAG

Protein sequence :
MEKYMKRALQLAKLGVGHTNPNPLVGAVIIKDGRIIGEGYHEYYGGPHAEINALKNAKEDVNGATLYVTLEPCCHHGKTP
PCVDAVIKSGIKNVFIAMEDPNELVAGRGIKKLEEAGLNVYTGLLKDEAEKLNEVFIKYITSREPYVILKSAMTIDGKIS
TFTGDSKWITNEKSREYVHKVRGSVMAIMVGINTVIKDNPHLTVRLQGYKNPLRVIVDSHGRIPLDANVIIDKSAKTLIA
TTDMMPHDKVKALKDLGVDVVTIEKKDNKVHLNKLIYTLGERGIDSILIEGGGTLNYSALKEGIVDKVMFYIAPKIIGGS
NSLTPVEGDGIALIKDAIMIEKIDIKKFDDDILIEGYIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-42 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-42 42