Gene Information

Name : Thexy_1329 (Thexy_1329)
Accession : YP_004471034.1
Strain : Thermoanaerobacterium xylanolyticum LX-11
Genome accession: NC_015555
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 1387620 - 1388936 bp
Length : 1317 bp
Strand : -
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: flagellar export ATPase, FliI, clade 2; ATPase, type III secretion system, FliI/YscN; KEGG: ttm:Tthe_1452 ATPase, FliI/YscN family; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 comp

DNA sequence :
ATGAGCAATAGTAATTTTGTTGATAGGTGCAAAGCTATATTGCAAGACAAAAATTTTATCAAGTATTACGGCAAGGTAAG
CCAAGTTGTTGGCTTAACAATTGAAAGCGTAGGCCCAATATCTAATATTGGCGATGTCTGTGAAATAAGATCAATAAATG
GCACTACTGTATATGCAGAAGTAATGGGATTCAAAGATGATAAAGTCTATTTGATGCCTTTAGGAGATATGGATGGCATA
GGTCCAGGTAATAGCGTTGTATCTACAGGGCAAAAATTAAAAATTGGCGTAGGAAAAGAATTGTTGGGAAGAGTTATTGA
TGCCTTAGGCAATCCGATTGATGGAAAAGGTGCAATAAAATGCAAAAAATTAGTCAGTACTAACAATACACCTCCGAATC
CGATTGAAAGAAAGAGAATAAGTGAAGTGATGACTTTAGGTATAAAAGCCATAGATGGTTTGCTTACTTGTGGTAAAGGT
CAGAGAATAGGAATCTTTGCAGGCAGTGGTGTTGGGAAAAGTACTTTACTTGGAATGATAGCCAGAAATGCTAAATCTGA
TATTAACGTTATCGCACTAATAGGTGAAAGAGGAAGGGAGGTTAATGAATTTATTGAGAAGGACTTAGGAGAAGACGGAT
TAAAAAGATCTATATTGGTGGTGTCTACGTCTGATACTCCTGCATTGATGAGAGTAAAAGGGGCTATGGCGGCTACGTCT
ATTGCAGAATATTTCAGGGATCAGGGCTTAGATGTATTGCTTATGATGGATTCTGTAACTAGGTTTGCTATGGCTCAGAG
AGAGATTGGATTATCAATAGGCGAAGCACCTGTTTCAAGAGGTTATACTCCGTCAGTTTTTTCGGTTCTTCCAAAGCTAT
TAGAAAGAGCCGGCTCTTCAAAACATGGCTCAATAACGGCTTTGTATACAGTTTTAGTAGATGGCGACGATTTAAATGAG
CCAATAACAGACGCAGTAAGAGGTATATTGGATGGGCACATCGTTTTATCGCGAAAGCTGGCAAATAAAGGTCAATATCC
TGCCATAGATGTTTTATCAAGCATCAGCAGGGTTATGAATGACATTGTCACTGATGAACATAAAAATTTATCGTTGCGGT
TTAAAAACATATTGTCTGTTTATGAAGAATCTGAAGATTTAATAAATATTGGCGCTTATGCAAAGGGCAGCAATCCTAAA
ATAGATGAGGCTATACTACTTCATGATGACATGATAAATTACATAAAGCAATCGACAAATGAAAAATATGACTTTGACGA
TGAAATAAATATGCTAAAAAATATATTGAACAGGTGA

Protein sequence :
MSNSNFVDRCKAILQDKNFIKYYGKVSQVVGLTIESVGPISNIGDVCEIRSINGTTVYAEVMGFKDDKVYLMPLGDMDGI
GPGNSVVSTGQKLKIGVGKELLGRVIDALGNPIDGKGAIKCKKLVSTNNTPPNPIERKRISEVMTLGIKAIDGLLTCGKG
QRIGIFAGSGVGKSTLLGMIARNAKSDINVIALIGERGREVNEFIEKDLGEDGLKRSILVVSTSDTPALMRVKGAMAATS
IAEYFRDQGLDVLLMMDSVTRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLERAGSSKHGSITALYTVLVDGDDLNE
PITDAVRGILDGHIVLSRKLANKGQYPAIDVLSSISRVMNDIVTDEHKNLSLRFKNILSVYEESEDLINIGAYAKGSNPK
IDEAILLHDDMINYIKQSTNEKYDFDDEINMLKNILNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-107 55
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-105 51
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-105 51
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-105 51
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-104 51
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 8e-104 51
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 6e-104 51
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-103 50
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 5e-90 50
escN NP_290268.1 hypothetical protein Virulence LEE Protein 7e-90 50
ECs4568 NP_312595.1 EscN Virulence LEE Protein 7e-90 50
escN AAC38383.1 EscN Virulence LEE Protein 9e-90 50
escN AAC31513.1 L0034 Virulence LEE Protein 5e-90 50
escN AAK26715.1 EscN Virulence LEE Protein 2e-90 49
escN AAL57542.1 EscN Virulence LEE Protein 2e-90 49
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-90 49
escN CAI43874.1 EscN protein Virulence LEE Protein 8e-91 49
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-88 49
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-90 49
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-90 49
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-90 49
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-99 48
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-99 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-86 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-86 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-88 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 8e-89 46
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-89 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 6e-89 46
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 6e-88 46
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-78 45
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 3e-91 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 3e-79 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 3e-79 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-86 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-79 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-80 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-76 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 4e-78 43
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-79 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 3e-78 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-85 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-75 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-75 41
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 7e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG2144 Protein 3e-106 53
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG0390 Protein 3e-106 53
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG0192 Protein 3e-109 53
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG1254 Protein 4e-104 51
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG0048 Protein 2e-105 50
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG0730 Protein 5e-90 50
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG0812 Protein 3e-90 50
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG2331 Protein 1e-92 47
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG2499 Protein 6e-95 47
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG0515 Protein 4e-89 46
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG1778 Protein 4e-73 42
Thexy_1329 YP_004471034.1 flagellar protein export ATPase FliI VFG2459 Protein 1e-81 41